Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01802 ATGGAGCAGGAGGAATATACAAAAGAAGGGATTGACTGGAGCTACTTAGAATTTGTAGATAATCAAGATGTACTGGATCTCATTGAAAAGAAACCTGGTGGAATTATTGCTCTGCTTGATGAAGCTTGTATGTTTCCTAAGTCAACTCATGAAACATTTTCACAGAAGCTTTATCAGACATTCAAAGATCACAAACGCTTCATTAAGCCAAAATTGACACGTTCAGACTTCACTGTTTGTCATTATGCAGGAGATGTTCAGTATCAATCTGAGCACTTTTTAGACAAAAACAAAGACTATGTTGTTCCTGAACATCAAGAGATGCTAAGTGCTTCCAAATGTTCATTTGTATCAGGTCTTTTCCCCCATTTCTGA 375 0.368 MEQEEYTKEGIDWSYLEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLYQTFKDHKRFIKPKLTRSDFTVCHYAGDVQYQSEHFLDKNKDYVVPEHQEMLSASKCSFVSGLFPHF 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01802 124 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 123 IPR027417 -
Vian3g01802 124 Pfam Myosin head (motor domain) 2 123 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian3g01802 124 Gene3D - 1 124 - -
Vian3g01802 124 ProSiteProfiles Myosin motor domain profile. 1 124 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian3g01802 124 PANTHER MYOSIN 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01802 Vian-Chr3 20576744 20579048 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01802 1 122 Myosins gene family AT1G54560 84.426 3.06e-71 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01802 K10357 - gmx:100803485 247.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01802 3 20576744 20579048 Vian3g01802 3 20576744 20579048 ECH