Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01782 ATGCAGATGCTCATAGACAAAGAAATGTCCAAACAGAAAGACTCCAAGCACTACCTACCAAATGTTGTAGCAAAACTAATGGGGCTTGAAACCCTTCCAAGTGGAGAGCCTAATTTATCTATGGGAAGAAGCTACAGAAGTGCTTATCCTCAACAAATGCATAGTCCTGTAGGCTTCCCATTCAGGCATTGGCAGCAGGAAGATAGGTTTATGGAGAGGGAAATACTTCATGAAGTTCACCCAAGCACAGAACAGGTTGCTTACAAAGAAATGTATGAAATATGGCAGCAATCTCAGAGAGCAAGGCATGCAAGTGGCAAGGTACCTGATAGAGGAAGATGGAGTGAAGATGTTGATGGGAAAAGAATGGCTCTCATTCGTCAGAAATTCATAGAAGCAAAACATCTGTCAACCGATGAGAGAATGCGTCAATCTAAACAATTTAAAGATGCCTTGGAAGTTCTAAGCTCCAACAGTGATCTCTTAATGAGGTTATTGGATTCTCAAAATGTTTATGAATTTTACTCAAGTCGACGTACTGATACAAAGCGCATTACTCTTATTAAACCTTCCAAGATGGACGACAATGACAAACCAGCCAGAAAGGAGAAAAGGAACAATAGACTAATTAAGAAATCACCAAATGTTGATCAAGCAGCTGGGTGGGAGAACAAGAATTCTGGAAACTCTCCAGATAGTCAGAAAGTTGATGAATCTCCAGTTCGAACCACTCGAATTGTGTTGCTGAAACCTAGCCCTGGGAGGACACCTGAGCAAAAGGATGCGATTTCTCCAACAACAACATCACCACCAAATCTGAGAAGTGGTAATTGCCATCAGGGACCTGAATATGACGATGCAATAGAATCCATTAGAGTGGCAAAAGAGATCACACAGCAAATGCATAAGGATCTGTGGAGCTATCAAAAGGATAAAACTCCACATTATTCTTCAGTTATTTCCAATGGCTATTCTGATGATGAGAGTTCGTTCAACAAATCATATCACGAGTATGCATCAGCAAATTTCAGTGATTTGGAAGCTATGTCAATGTCATCGCTGCCAAGGCTTTCATGGGATTACAATTACATCAATGGCTGTAGCAGTCCTTATTCTACAATGTCCTTGGGTCGCGTGCCTTGCTCCCCTGAGTCATCAGTGTGCAGAGAGGCGAAGAAAAGGCTTTCTGAAAGATGGACTATGATGACATCAGATAATAAGGGTCCTCAAGAACAAACGACAGTGAGAAGAAACTCTACCTTGGGTGAGATGCTTTCTCTTACCCACACGAAGAAATCTGCAACATCTGTGGTTGAGAGTATTCAAGAGGACCAAGAACCCGGAAAATCTGTTTCTTGCAGTCATTCTTTCAATGCAGAAATAAGCAATCAGGGCTCTCCTAAAAATCTTCCCAGGTCAAATTCTGTGTCTGCATCCTCTACTGTCAATGGAACTGATCTCACAGTTCAAGTTGCTGCTCCAAAAACTGGCAAATCACAAGCCTCCAGGGCACAGACAAAGTCAAAGAGGAGATCAACGTTTAAAGAAAAAGTAGCCAGTCTCTTGTTCTCAAAGAGTAAGAAATCAACCAAGGAAAAGCCAAGTTCTCCTCAATCTAAAGATGCATCCCAACCCGCTCCTATCGTCACTGAAGCATTAGTTCTTCCACCTGAAGTCCTTAGGGATGATGAGTCTCAAATCATCAATGTGGATAGTTTTGAAGAGTTTTCTCTTGTAGCTCTATGTGAATCATCAGAGAAAACTTCCACAAATTCAGTTGCTAACAGACAAGAAGAAGACATGATTACACTAGAGCCTGGATTGGCAGTGGCAGGGTCCATGATGCTAGAGATTAATTCGAGCGAAAGCCCAGATCAGCCTAGTCCATTCTCAGTGTTACAACCTCCATTTGAAGATGATCAACTAGGATCACAGGTGGAACTGAAGTCCAATTTAATTGACAAATCACCACCTATAGAATCAATAGCTAGGACCCTATCATGGGATGATTCTTCTGCAGAAGTGGCAAGCCCCCATCTATTAAAACCCTTAACGGTTCCTTCCTTGGACTCCAAGATAGAGGAAAAAGAGTGGCTTCTCTTGGTCCACAACCTACTATCAGCAGCTGGACTTGATGACCAGCAGCAATATGACTCGTTTTACACCAGATGGTATTCCCTTGAAAGCCCATTGGACCCGTCATTGAGGGACACATTACTCAATGAGAAGGAGCCTCAGCCAATGCACGAGGGCAGAAGAAGGAAGATGAGATCAAATCATAAACTTGTTTTTGATTATATCAATGCTGCACTATTGGAACTTGTTGGTTATGGGTCAGAAAAGTTCTTAAAGGGCAGTGGGAACCACTGCAGGGTCCTAATCCAAGAGAGTGCACCGGAATCTACCTTGTTGGTGGACCACATTGTGGCCAAAATAAAGGAATTAATGGCAAGTGGGGTGAGGTGTGAGTGGGACAGCAACAGCCTGGTGGTAGAAAATGTTGTCAGAAAAGAGATTGTGCAGATAGGGTGGGTGGACCTTATGAAATTGGAGATAGACGTTTTGGGAAAGGAGATAGAGGGGGACTTGATTCAAGAGCTTGTGGAGAATGCAGTGGTTGATTTTACAGGCAGAGCCTGA 2640 0.4273 MQMLIDKEMSKQKDSKHYLPNVVAKLMGLETLPSGEPNLSMGRSYRSAYPQQMHSPVGFPFRHWQQEDRFMEREILHEVHPSTEQVAYKEMYEIWQQSQRARHASGKVPDRGRWSEDVDGKRMALIRQKFIEAKHLSTDERMRQSKQFKDALEVLSSNSDLLMRLLDSQNVYEFYSSRRTDTKRITLIKPSKMDDNDKPARKEKRNNRLIKKSPNVDQAAGWENKNSGNSPDSQKVDESPVRTTRIVLLKPSPGRTPEQKDAISPTTTSPPNLRSGNCHQGPEYDDAIESIRVAKEITQQMHKDLWSYQKDKTPHYSSVISNGYSDDESSFNKSYHEYASANFSDLEAMSMSSLPRLSWDYNYINGCSSPYSTMSLGRVPCSPESSVCREAKKRLSERWTMMTSDNKGPQEQTTVRRNSTLGEMLSLTHTKKSATSVVESIQEDQEPGKSVSCSHSFNAEISNQGSPKNLPRSNSVSASSTVNGTDLTVQVAAPKTGKSQASRAQTKSKRRSTFKEKVASLLFSKSKKSTKEKPSSPQSKDASQPAPIVTEALVLPPEVLRDDESQIINVDSFEEFSLVALCESSEKTSTNSVANRQEEDMITLEPGLAVAGSMMLEINSSESPDQPSPFSVLQPPFEDDQLGSQVELKSNLIDKSPPIESIARTLSWDDSSAEVASPHLLKPLTVPSLDSKIEEKEWLLLVHNLLSAAGLDDQQQYDSFYTRWYSLESPLDPSLRDTLLNEKEPQPMHEGRRRKMRSNHKLVFDYINAALLELVGYGSEKFLKGSGNHCRVLIQESAPESTLLVDHIVAKIKELMASGVRCEWDSNSLVVENVVRKEIVQIGWVDLMKLEIDVLGKEIEGDLIQELVENAVVDFTGRA 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01782 879 MobiDBLite consensus disorder prediction 219 237 - -
Vian3g01782 879 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 878 - -
Vian3g01782 879 MobiDBLite consensus disorder prediction 259 276 - -
Vian3g01782 879 Pfam Protein of unknown function (DUF3741) 127 170 IPR022212 -
Vian3g01782 879 Pfam DUF761-associated sequence motif 20 34 IPR032795 -
Vian3g01782 879 MobiDBLite consensus disorder prediction 186 283 - -
Vian3g01782 879 MobiDBLite consensus disorder prediction 427 547 - -
Vian3g01782 879 Pfam Domain of unknown function (DUF4378) 702 869 IPR025486 -
Vian3g01782 879 MobiDBLite consensus disorder prediction 186 204 - -
Vian3g01782 879 MobiDBLite consensus disorder prediction 427 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01782 Vian-Chr3 20209333 20212882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01782 1 876 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 36.198 2.25e-134 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01782 - - gmx:100787955 1274.23