Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01762 ATGAAAGCACAGTTGGATTGGGAAAAGCGCTACAAAATCATTAGAGGTATTGCTCGAGGTCTTCTCTACCTTCACGAAGATTCTCAGCTACGAATTATCCATCGAGATCTTAAAGCAAGCAACATTCTCTTAGACGAAGAGATGAATCCTAAGATAGCAGATTTTGGCATGGCAAGACTGGTTTCATTGGATCAAACTCAAGTAAACACAGATAGAATTGTTGGAACCTATGGATACATGGCACCGGAGTATGCAATGCAAGGACAGTTTTCAGTGAAATCGGATGTGTACAGTTTTGGTGTACTGATTCTTGAGATTGTGAGCGGCCAGAAAAACAGTGGAATTAATAATGGAGAAAATATGGAGGATCTACTAAGCTTCGCTTGGAGAAACTGGAAGGAGGGGAAGGCTATAAGTGTTGTAGATCCATCACTTAATAGCAATTCACGGAATGAAATGATGAGATGCTTGCATATTGGTTTACTATGTGTTCAAGAAAATTTTCTAGACAGACCAACCATGGCTAACATAATACTGATGCTTGATGGCTATTCTATGAGTCTCCCTATTCCTGCAGAACCAGCATTTTATGTGAACAATAGAACTAGAAGCCTTTCAGAGATGCAGTCATGGGAATATAATTCAAGGGAAACAGGATCAAGTGAACCGATACTTAAATCAGCTCAGGAATCAGAAAATGAAGCTTCAGTTACTGAGTTATACCCTCGCTAA 732 0.3962 MKAQLDWEKRYKIIRGIARGLLYLHEDSQLRIIHRDLKASNILLDEEMNPKIADFGMARLVSLDQTQVNTDRIVGTYGYMAPEYAMQGQFSVKSDVYSFGVLILEIVSGQKNSGINNGENMEDLLSFAWRNWKEGKAISVVDPSLNSNSRNEMMRCLHIGLLCVQENFLDRPTMANIILMLDGYSMSLPIPAEPAFYVNNRTRSLSEMQSWEYNSRETGSSEPILKSAQESENEASVTELYPR 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01762 243 Pfam Protein tyrosine and serine/threonine kinase 3 179 IPR001245 GO:0004672|GO:0006468
Vian3g01762 243 ProSitePatterns Serine/Threonine protein kinases active-site signature. 32 44 IPR008271 GO:0004672|GO:0006468
Vian3g01762 243 SMART serkin_6 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g01762 243 MobiDBLite consensus disorder prediction 212 243 - -
Vian3g01762 243 FunFam cysteine-rich receptor-like protein kinase 10 1 188 - -
Vian3g01762 243 Gene3D Transferase(Phosphotransferase) domain 1 1 188 - -
Vian3g01762 243 ProSiteProfiles Protein kinase domain profile. 1 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g01762 243 SUPERFAMILY Protein kinase-like (PK-like) 5 181 IPR011009 -
Vian3g01762 243 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 239 - -
Vian3g01762 243 MobiDBLite consensus disorder prediction 212 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01762 Vian-Chr3 19974052 19975040 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01762 4 243 Receptor kinase-like Gene Family AT4G38830 58.607 1.18e-94 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vian3g01762 PK_Tyr_Ser-Thr 2.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01762 - - vra:106771832 451.055