Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01757 ATGGCACCCAATAAAAGAGTGGTAGCGGCCTATCGTGCAATGGGAAGTCTTGGAATTGATGAGTCGAAAGTGAAATCAGCGATAAAGAAACTCCTCAAAGTGTTTGACAAAAACTGGGAACTTATAGAGGCAGAGAACTATAGAGTTCTAGTAGATGCTATATTTGAGGAGGACGATAATATGGTACCCGAAGAGAAAAAGAAAGTCCGGTCTGACGATGTACATGACACTCATCATTCTTTGCCTTCCTTTTCAAACAACCAAGAAGATGAGACAGAGTGTGAAGAGGCTCAGATGCATAATGCCCAACCTTTAAAAAGGCTGCGATTAAGAGGCCAGGACAGTCAGCCTTTGCATCCTCTGACCAACATTGCCACCAGCCCTCCTTCGAAAAGGCCTAAATTAGAAGATAATGCATTACACCAGGGTTCTTCTGGGAAGAAACCTCAAAACAAGCCAGAGTCATCTGATGGGAATCCAAGGATTGAAGCACCGTTACTTAGACCACCAGATGACATTGTTGATAAGGGAAAGCAACCTGCATCAGCCCAAGTTTTGCAAAGAGGAAGAGAACTTACATCTGGAAGATCGTCCCCATCCACACCATCTAAAGAACGAACAGTTAAATCAGGGAAGTTTTTGATGCCAAACAACACAATACCTCGTCCGCTGGCACTTATCATACCCAAGGACGAGCCTATTGATGAAGTGCCTGATTATGGAATGCCCATTGCAGTGATTCATCCTGAACCATCACGCGTAAGGGACTCATCATTCAGGAATGGTGTAGCTGGAAAGCATGTCAACCATGATACTGTGACATCATCAGCATGCAGAAATAGAGTCAGAGATGAAGATGTTCTTCCTACCTCAAATGAAGAAGCCACTTGTAATGTAGAGATAGCCTCATCAACTCTTGGAGAGGTAAAACTTTCTTTGAGCTGCAGCTCAGCACTTTGGGGATCAAATTTTCACATGCCTAGTCGAGATGAACTCATAGAAATGATGGAGGCGAAATGCCTGCGTTCATATAAAATTGCTGACCCAAATTTCTCTGTTATGAAACTGTTGATGGATGTATGCAATTGCATGTTGGAACTCAGAAACAATTCTAATAATGATCCAGAAGAAGGTTCTATAGGGACATCCAATGTTCATATGTCGAAGGAATCACAAGAACCTGACACACTGAGTGTGGAAAGAAACAAAGAATTGGACACCCTTTCTCATGTTTCAAATGGATCAATCAATGTTAATCCTTCTGCTGCATTGGTTTCTCCCCATAGTTTCCTTCCTCGTGCTGACCTGATTGGTCTGAATGATGCTGTCTTGGTTTCCAAGATGGACCAAAAAACAAATGATTTTTCGCAATGTAATGCAAATAAGGAGCTGGAAGATTCTATGTCTCCAAATTCACATAGTTTAGTGATTGTTCCACAGCATCAGCTGACATCTGATGATATAAGGTCTTTTTATAATGCTAATGACCTCACAAAAGGAGAAGAAAATGTTGAAATTCCTTGGGTGAATGAATATACTAACGATTTCCCAGCATCCTTTAACTACATACCCCGAAACCTTGTGTTCCAAGATGCTTATGTTAACATTTCTCTGTCACGTATTGGCAGTGAGGACTGTTGTTCAACTTGTATGGGCAATTGTGTCTTGTCACCTTGTGCTTGTGCAAATAAAACTGGTGGTGAATTTGCTTATAGTTCTCAAGGCCTACTGAGGGAAGAATTTTTGGAAGAGTGCATTGCCACTAATCGCAATCCACAAAACCATTTCTTTTATTGCAAAATTTGCCCACTTGAAAGATCTAAGAATGATGGTGGTTTAGAACCTTGTAAAGGACACTTAAAGAGGAAGTTTATTAAAGAATGCTGGAGCAAATGTGGCTGTGGGAAACAGTGTGGAAATCGGATTATCCAGCGAGGAATAACTTGCAAATTGCAGGTGTTTTTCACTTCAGAAGGTAAAGGATGGGGTCTTCGTACCTTAGAGGACCTGCCTAAAGGTGCATTTGTATGTGAGTTTGTTGGAGAAATTTTATCTATTAAAGAGTTGCATGAGAGGAACATGAAATGTACTGGAAAAGGGAACCATACATACCCAGTTCTACTGGATGCAAATTGGGATTCAGGATCTATGAAGAACAAAGAAGCTCTATGCTTGGATTCAGCTTCGTTTGGCAACATTGCTAGGTTTATCAATCACAGATGTTTTGATGCAAACTTGGTTGAGATCCCAGTTGAAGTTGAGGATCCTGATCATTATTACTACCATTTTGCTTTTTTTACTTCCAGAAAAGTAGCAGCACTTGAGGAGTTAACATGGGATTATGGCATTGACTTTGATGATCATGATCATCCTATCAAGCTGTTCCAGTGCAGTTGTGGCAGTAAATTATGCAGGCATATAAAGAGGTCAAACAGATCCAGCAGATCTGCGTCAATTTCCGGATGA 2466 0.4096 MAPNKRVVAAYRAMGSLGIDESKVKSAIKKLLKVFDKNWELIEAENYRVLVDAIFEEDDNMVPEEKKKVRSDDVHDTHHSLPSFSNNQEDETECEEAQMHNAQPLKRLRLRGQDSQPLHPLTNIATSPPSKRPKLEDNALHQGSSGKKPQNKPESSDGNPRIEAPLLRPPDDIVDKGKQPASAQVLQRGRELTSGRSSPSTPSKERTVKSGKFLMPNNTIPRPLALIIPKDEPIDEVPDYGMPIAVIHPEPSRVRDSSFRNGVAGKHVNHDTVTSSACRNRVRDEDVLPTSNEEATCNVEIASSTLGEVKLSLSCSSALWGSNFHMPSRDELIEMMEAKCLRSYKIADPNFSVMKLLMDVCNCMLELRNNSNNDPEEGSIGTSNVHMSKESQEPDTLSVERNKELDTLSHVSNGSINVNPSAALVSPHSFLPRADLIGLNDAVLVSKMDQKTNDFSQCNANKELEDSMSPNSHSLVIVPQHQLTSDDIRSFYNANDLTKGEENVEIPWVNEYTNDFPASFNYIPRNLVFQDAYVNISLSRIGSEDCCSTCMGNCVLSPCACANKTGGEFAYSSQGLLREEFLEECIATNRNPQNHFFYCKICPLERSKNDGGLEPCKGHLKRKFIKECWSKCGCGKQCGNRIIQRGITCKLQVFFTSEGKGWGLRTLEDLPKGAFVCEFVGEILSIKELHERNMKCTGKGNHTYPVLLDANWDSGSMKNKEALCLDSASFGNIARFINHRCFDANLVEIPVEVEDPDHYYYHFAFFTSRKVAALEELTWDYGIDFDDHDHPIKLFQCSCGSKLCRHIKRSNRSSRSASISG 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01757 821 CDD SET_SETDB-like 518 782 - -
Vian3g01757 821 SMART preset_2 494 633 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vian3g01757 821 MobiDBLite consensus disorder prediction 372 394 - -
Vian3g01757 821 Gene3D - 1 60 IPR043017 -
Vian3g01757 821 MobiDBLite consensus disorder prediction 186 207 - -
Vian3g01757 821 ProSiteProfiles SET domain profile. 649 782 IPR001214 GO:0005515
Vian3g01757 821 Pfam Ubiquitin-binding WIYLD domain 4 60 IPR018848 -
Vian3g01757 821 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 821 IPR025776 -
Vian3g01757 821 MobiDBLite consensus disorder prediction 116 208 - -
Vian3g01757 821 SMART set_7 649 788 IPR001214 GO:0005515
Vian3g01757 821 ProSiteProfiles Pre-SET domain profile. 546 646 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vian3g01757 821 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 816 - -
Vian3g01757 821 Pfam SET domain 661 782 IPR001214 GO:0005515
Vian3g01757 821 MobiDBLite consensus disorder prediction 66 99 - -
Vian3g01757 821 Gene3D SET domain 478 791 IPR046341 -
Vian3g01757 821 MobiDBLite consensus disorder prediction 372 392 - -
Vian3g01757 821 MobiDBLite consensus disorder prediction 143 157 - -
Vian3g01757 821 Pfam Pre-SET motif 498 641 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vian3g01757 821 SUPERFAMILY SET domain 503 805 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01757 Vian-Chr3 19891171 19897715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01757 625 807 C2H2 Transcription Factor Family AT2G23740 39.683 1.56e-29 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vian3g01757 Pre-SET 1.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01757 - - vun:114190802 1508.43