Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian3g01748 | ATGGCGGCAGCAGAAGAAGATTTCCCTGGAATTCGCGTCCGCGGGATGCAATTTTCCTATGAAGCGCAACAACCGCCGCTCTTCCTCGACTTCAACCTCAACGTCGAGCCTGGATCGCGGTGCCTCCTCGTCGGTGCCAACGGATCCGGTAAGACGACTTTGCTGAAGATTCTAGCGGGGAAGCATATGGTTGGAGGAAGAGATGTTGTGCGCGTGTTGAATGGTTCCGCTTTTCATGACACTCAACTCGTCTGTAGTGGAGATCTCGCTTATTTGGGCGGATCCTGGAGCAAAAACGTTGGCTCTGCTGGAGAAATTCCGCTTCAAGGAGACTTCTCTGCCGAACATATGATCTTTGGAGTTGAGGGTGCTGACCCAGATAGGAGAGACAAGTTAATTGAGCTGCTTGATATCGATCTGCAGTGGCGAATGCACAAGGTATCTGATGGCCAGCGGCGTCGAGTGCAAATCTGTCTTGGTCTTCTTTATCCATATAAGGTTCTCTTGCTTGATGAAGTCACTGTTGATCTGGATGTTGTGACTCGGATGGATTTGTTGGAATTCTTTAGGGAAGAATGTGAACAGAGAGAAGCTACAATAGTATATGCAACTCATATTTTTGATGGACTAGAGGCATGGGCAACTCATTTGGCATACATACAAGATGGTGAACTGAGAAGAGCAGAAAAGATATCAGATGTCAATGAGTTGAAATCTTCCACTAATCTGCTATCTGTTGTTGAGGACTGGCTCCGTGCTGAAACAAAAGGTGTAAAGAAGAAACCTGTCCAAAAGAATTTTGCGAGTTCTCCATTCTTTTCATCCAGACACATGGCCTATTATCGATAG | 849 | 0.4653 | MAAAEEDFPGIRVRGMQFSYEAQQPPLFLDFNLNVEPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVRVLNGSAFHDTQLVCSGDLAYLGGSWSKNVGSAGEIPLQGDFSAEHMIFGVEGADPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICLGLLYPYKVLLLDEVTVDLDVVTRMDLLEFFREECEQREATIVYATHIFDGLEAWATHLAYIQDGELRRAEKISDVNELKSSTNLLSVVEDWLRAETKGVKKKPVQKNFASSPFFSSRHMAYYR | 282 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian3g01748 | 282 | PANTHER | SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE | 11 | 249 | - | - | |
Vian3g01748 | 282 | Gene3D | - | 10 | 264 | IPR027417 | - | |
Vian3g01748 | 282 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 11 | 236 | IPR027417 | - | |
Vian3g01748 | 282 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 11 | 247 | IPR003439 | GO:0005524 | |
Vian3g01748 | 282 | SMART | AAA_5 | 37 | 224 | IPR003593 | GO:0016887 | |
Vian3g01748 | 282 | Pfam | ABC transporter | 30 | 174 | IPR003439 | GO:0005524 | |
Vian3g01748 | 282 | FunFam | ABC transporter I family member 21 | 112 | 277 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian3g01748 | Vian-Chr3 | 19806991 | 19809951 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian3g01748 | 11 | 239 | Calmodulin-binding Proteins | AT2G36910 | 23.237 | 2.89e-09 | 55.8 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vian3g01748 | 3 | 19806991 | 19809951 | Vian3g01748 | 3 | 19806991 | 19809951 | ECH |