Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01746 ATGGATTCTGCAAGGAGTTGGCTTCAGAAGTTCCAGCCTCGAGATAGAACCAGGGCTGCTGCGAAGAAGAAGGAGGAGGATAGTATTGGAGGAAACGAGGATTTGAATGCGGCGGTGGATGAAGCAGTGCTTTCCAGTGTCACGAAACAGAAGGTGGCCGCAGCAAAGCAGTACATTGAAAATCATTACAAGGAGCAAATGAAGAACCTTCAGGAGAGGAAAGAGCGTCGAACCATCTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCTGAGGAGGATCAAAACAACCTGCTTAAATTTTTAGAGAAAAAGGAAACTGAATATATGCGCCTTCAGAGGCATAAGATGGGTGTTGATGATTTTGAGTTATTAACAATGATAGGAAAAGGAGCATTTGGAGAGGTCAGAGTCTGTAGGGAGAAGACTAGTGGTCATGTGTATGCAATGAAGAAGCTAAAAAAATCAGAGATGCTCCGCAGAGGCCAGGTTGAGCATGTTAAAGCTGAAAGGAATCTCCTCGCAGAGGTTGACAGCAATTGCATAGTCAAACTTTATTGTTCATTCCAGGATGCTGAATATTTGTATCTTATTATGGAGTATCTACCGGGTGGGGATATGATGACTCTACTAATGAGAAAGGATACCTTGACCGAAGATGAAGCCAGATTTTATGTTGGAGAAACTGTTCTGGCTATTGAATCTATACATAAACACAATTATATACACAGGGATATCAAGCCAGACAATTTGTTACTTGAAAGATACGGGCACTTGAAATTGTCAGATTTTGGACTTTGTAAACCATTAGATTGCAATACACTTGAAGAAAAGGATTTTTCTGTGGGTCAGAATGTGAATGGAACTCCACAAAACGAAGAGCGGATAACTCCTAAACGTTCACAACAAGAACAACTTCAACATTGGCAAATGAACAGGAGAACACTTGCTTATTCCACAGTTGGTACACCAGATTATATTGCTCCAGAAGTTCTTTTGAAGAAAGGTTATGGGATGGAATGTGATTGGTGGTCACTTGGAGCGATTATGTATGAAATGTTGGTGGGATATCCACCTTTTTATTCTGATGATCCGATGTTGACTTGTAGGAAGATTGTAAATTGGAAAGCTTATTTGAAATTTCCTGAAGAAGCTAGGCTGTCCCCAGAAGCTAAAAATCTTATTAGTAAACTTTTGTGTAATGTAAATCAGAGGCTGGGGTCAAATGGTGCAGATGAAATAAAGGCTCATCCATTCTTCAAAGGTGTTGAATGGGATAAGCTGTATCATATGGAAGCTGCATTTATTCCTGAGGTCAATGATGAGTTAGACACTCAAAATTTTGAAAAGTTTGATGAGTCTGACAGCCAAAGTCAATCATCGTCAAGATCTGGTCCATGGAGGAAGATGCTTTCATCTAAGGACTTAAATTTTGTTGGATACACATACAAGAACTTTGAAATTGTCAACGATTATCAAGTCCCTGGGATGGCTGAACTGAAAAAGAAACAATCCAAACCAAAGAGGCCAACCATCAAGTCACTTTTCGAAACACCAGAGCAAGAGTTGTCCGACACATCTGCTCAAGGAAGCTTTTTAAAGCTCTTGCCACCCCAGTTAGAGGTATCTCGCAGAGACAAGAATCTTCCTCCCAGGTCCTAA 1659 0.4063 MDSARSWLQKFQPRDRTRAAAKKKEEDSIGGNEDLNAAVDEAVLSSVTKQKVAAAKQYIENHYKEQMKNLQERKERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTSGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDAEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLERYGHLKLSDFGLCKPLDCNTLEEKDFSVGQNVNGTPQNEERITPKRSQQEQLQHWQMNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMLTCRKIVNWKAYLKFPEEARLSPEAKNLISKLLCNVNQRLGSNGADEIKAHPFFKGVEWDKLYHMEAAFIPEVNDELDTQNFEKFDESDSQSQSSSRSGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMAELKKKQSKPKRPTIKSLFETPEQELSDTSAQGSFLKLLPPQLEVSRRDKNLPPRS 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01746 552 SUPERFAMILY Protein kinase-like (PK-like) 94 473 IPR011009 -
Vian3g01746 552 MobiDBLite consensus disorder prediction 500 552 - -
Vian3g01746 552 Pfam Protein kinase C terminal domain 438 482 IPR017892 GO:0004674|GO:0005524|GO:0006468
Vian3g01746 552 SMART pkinase_C_6 420 484 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vian3g01746 552 FunFam Non-specific serine/threonine protein kinase 318 437 - -
Vian3g01746 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Vian3g01746 552 Gene3D Transferase(Phosphotransferase) domain 1 205 283 - -
Vian3g01746 552 Gene3D Transferase(Phosphotransferase) domain 1 316 439 - -
Vian3g01746 552 FunFam Non-specific serine/threonine protein kinase 205 272 - -
Vian3g01746 552 SMART serkin_6 121 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g01746 552 Pfam Protein kinase domain 122 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g01746 552 PANTHER SERINE/THREONINE-PROTEIN KINASE 36 471 - -
Vian3g01746 552 MobiDBLite consensus disorder prediction 516 532 - -
Vian3g01746 552 FunFam Non-specific serine/threonine protein kinase 92 204 - -
Vian3g01746 552 CDD STKc_NDR_like 119 483 - -
Vian3g01746 552 ProSiteProfiles Protein kinase domain profile. 121 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g01746 552 Coils Coil 63 83 - -
Vian3g01746 552 MobiDBLite consensus disorder prediction 9 31 - -
Vian3g01746 552 MobiDBLite consensus disorder prediction 1 32 - -
Vian3g01746 552 CDD MobB_NDR_LATS-like 55 116 - -
Vian3g01746 552 ProSiteProfiles AGC-kinase C-terminal domain profile. 420 492 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vian3g01746 552 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Vian3g01746 552 Gene3D Phosphorylase Kinase; domain 1 92 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01746 Vian-Chr3 19770171 19776800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01746 1 545 AGC Kinase Gene Family AT3G23310 75.774 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Vian3g01746 Pkinase 8.4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01746 K08790 - gmx:100820558 1013.06