Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01735 ATGGCCATGAGTACTGCCTCAGCTACTGGTTCTCACTCCCGAAATGGATTCCGTTTCTCGGACCACGAAAATGGAGACTACAATCAACACAACTATGGTCAAGCTTTCTCAGTGGCCGGAAGTGAGGATTTTGAAGGACAGAAAGCATTCTACAGCAATGAAGAGAAACGGAAAGATAAGAAAAGTTTAATGAGCAACGACCAAGAAGACGACAATCTTTTGGCTGAGGCAAGGCAACCATTGTGGCGCAAGGTTCCAATAGCTTCAAGCCTAATCAACCCATATCGCATAGTCATAATCTTGCGTGTGGTTATCCTAGTTTTCTTCTTCCACTTGCGCATCACAACTCCAGTGCATGATGCACTTGCCTTATGGATAATCTCTGTAGTCTGTGAAATCTGGCTTGCATTATCTTGGATGGTTGACCAACTCCCCAAGTGGTTCCCTATTACTCGTGAAACTTACCTTGAACGTTTGTCCTTAAGGTTTGAGAGTGAAGGAGAGCCAAACCTTCTAGCCCCGGTTGATATCTTTGTAACCACTGCAGACCCTTTTAAGGAACCACCTATTATAACAGCAAACACGGTTTTATCAGTCTTGTCTGTTGATTACCCTGTTGATAAGGTTAGCTGCTATGTCTCAGATGACAGTGCTTCAATGCTTCTCTTTGATACCTTGTCAGAAACTGCCGAGTTTGCTAGAATATGGGTTCCTTTTTGTAACAAATACAACATTGAGACAAGGGCACCTGAGTTTTATTTCTCTGAGAAACTTGATTACTTGAAAGATAAGGTGCACCCTACATTTGTTAAGGATCGCAGGGCTATGAAGAGAGAATACGAAGAATTCAAGGTGAAAATTAACATACTGGTTGCAAAGGCTCAGAAGAAACCAGAAGAAGGTTGGGTTATGAAAGACGGTAACCCATGGCCTGGGAGCAACATGGATGATCATCCCGGAATGATTCAGGTATGTCTAGGAAGTACTGGCTCACTGGATAAGGAAGGCAAAGAATTACCTCGGCTTGTGTATGTTTCCAGGGAAAAACGTCCTGGATATCAACACCACATGAAAGCTGGTGCCATGAATGCTCTGGTTCGAGTTTCTGCTGTGCTTACGAATGCACCTTTTGCACTAAATCTGGATTGTGACCAATTCATCAATAATAGCAAGGTTCTCAGGGAGTCCATGTGCTTTTTAATGGACCCCCAACTTGGAAAGAAGTTCTGTTATGTCCAATTTCCAAAAAGGTTCAATGGCATCGATTGCAAAGACAGATATGCTAATCACAATACTGTGTTCTTTGATATCAACATGAAATGTCTTGATGGGATTCAAGGTCCTCTGTATGTTGGTACTGGATGTGTATTCAACAGGCAAGCATTATATGGCTTTGATCCACTTTCTGATAAAAGGCCAAAGATAAAGAGTTGCTGCTGGCCTTCATCCTGCAGCTGCTGTTGTAGTGACTCCGAGTCTTCATCTGATGACGACACTGATCAGGAACTTGTAGACTTTGATGACGAAGAGGAAGAGGAATTATCCTTCATGTCCATGAAAAGTTTACAGAAACGATTTGGACAATCACCGGTTTTCATTGCTTCTGCTTTGATGGAAGATGGTGGACTTCCCAAAGGCACAAACACCCGAGTACTGATTAAGGAAGCAATTCATGTTATAAGCTGTGACTATGAAGAGAAAACTGAATGGGGAAAAGAGATTGGGTGGCTATATGGTTCAGTCACAGAAGACATTTTAACTGGGTTCAACATGCATTGTAGAGGATGGAAATCAGTGTACTGCATGCCAAAGAAAGCCGCTTTTAAGGGATCTGCTCCTATAAATCTATCAGATCGATTACACCAAGTTCTGAAATGGGCTGCTGGTTCTACTGAGATTTTCTTTAGTGGCTATTGTCCTTTGTGGTATGGCTATAGTGGAAAACTGAAATTGCTACAGAGGTTGGCCTACGTTAACTCCATCGTCTATCCATTTACCTCTATCCCCCTGCTGATCTACTGTACAATTCCTGCTGTCTGTCTTCTGACTGGAAAGTTCATCATCCCCACTCTGTCAAACCTTGCTAGCATTTGGTTAATGGCCTTATTTATCTCCATCATCTTAACTTGTGTGCTAGAGCTTCGTTGGAGTGGGGTTAGCATTCATGACTGGTGGCGCAATGAGCAATTCTGGGTCATTGGGGGTGTATCTTCACACCTTTTTGCTGTATTTCAAGGTCTTCTTAAAGTTGGAGGAGTAAACTCTAGCTTCACCGTGAGAGCAAAATCAGCTCATGACACTTCATTTGGACAGTTCCATCTCTTCAAGTGGACTAGTCTTCTAATCCCACCAACAAGTCTTGTGATCTTAAATATGGTGGGAATTGTGGCTGGAATCTCTGATGCCATTAACAATGGCTATGACTCATGGGGACCTTTCTTTGGGAAGCTTTTCTTCTCCTTGTGGGTCATTGTGCACTTGTATCCTTTCCTCAAAGGACTAATGGGAAAGCAAAACAGAACCCCTACCATTGTAGTCCTCTGGTCAATACTTGTAGCCATAATTTTCTCAATGATTTGGGTGAGAATTGATATTTTCTTGCCCAAGCAGACAGGTCCAGCACTCCGACAGTGTGGGATAAGATGCTAA 2649 0.427 MAMSTASATGSHSRNGFRFSDHENGDYNQHNYGQAFSVAGSEDFEGQKAFYSNEEKRKDKKSLMSNDQEDDNLLAEARQPLWRKVPIASSLINPYRIVIILRVVILVFFFHLRITTPVHDALALWIISVVCEIWLALSWMVDQLPKWFPITRETYLERLSLRFESEGEPNLLAPVDIFVTTADPFKEPPIITANTVLSVLSVDYPVDKVSCYVSDDSASMLLFDTLSETAEFARIWVPFCNKYNIETRAPEFYFSEKLDYLKDKVHPTFVKDRRAMKREYEEFKVKINILVAKAQKKPEEGWVMKDGNPWPGSNMDDHPGMIQVCLGSTGSLDKEGKELPRLVYVSREKRPGYQHHMKAGAMNALVRVSAVLTNAPFALNLDCDQFINNSKVLRESMCFLMDPQLGKKFCYVQFPKRFNGIDCKDRYANHNTVFFDINMKCLDGIQGPLYVGTGCVFNRQALYGFDPLSDKRPKIKSCCWPSSCSCCCSDSESSSDDDTDQELVDFDDEEEEELSFMSMKSLQKRFGQSPVFIASALMEDGGLPKGTNTRVLIKEAIHVISCDYEEKTEWGKEIGWLYGSVTEDILTGFNMHCRGWKSVYCMPKKAAFKGSAPINLSDRLHQVLKWAAGSTEIFFSGYCPLWYGYSGKLKLLQRLAYVNSIVYPFTSIPLLIYCTIPAVCLLTGKFIIPTLSNLASIWLMALFISIILTCVLELRWSGVSIHDWWRNEQFWVIGGVSSHLFAVFQGLLKVGGVNSSFTVRAKSAHDTSFGQFHLFKWTSLLIPPTSLVILNMVGIVAGISDAINNGYDSWGPFFGKLFFSLWVIVHLYPFLKGLMGKQNRTPTIVVLWSILVAIIFSMIWVRIDIFLPKQTGPALRQCGIRC 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01735 882 MobiDBLite consensus disorder prediction 1 15 - -
Vian3g01735 882 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 78 849 - -
Vian3g01735 882 MobiDBLite consensus disorder prediction 1 20 - -
Vian3g01735 882 Pfam Cellulose synthase 175 875 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vian3g01735 882 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 281 470 IPR029044 -
Vian3g01735 882 FunFam Cellulose synthase 292 466 - -
Vian3g01735 882 SUPERFAMILY Nucleotide-diphospho-sugar transferases 186 698 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01735 Vian-Chr3 19641112 19645508 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01735 66 882 Cell Wall Biosynthesis AT5G17420 68.331 0.0 1208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01735 K10999 - gmx:100777278 1566.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01735 3 19641112 19645508 Vian3g01735 3 19641112 19645508 ECH