Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01710 ATGTTTTGTGATCACACATTAGGGTGTCTGGCAATTGATGCTCCGAGGAACAAACAGGTTCATAGACAACGACTACCTCCGAATCTGTCACCTGATTCTTGTTCAGGCGGTGGTGTTGCTGCAGAGAAAGATTCGTTTTCTCACAAATTTGGTTGGAGATCTTCGAAAAAACTGCTTGGAACACCGATTAAGAAGTTATTAGACGAAGAGATGTCACCGAAATCTGAATCAAAAAGAAGATCCCCTGGAGTCATCGCCAGATTGATGGGTCTTGATGGACTGCCATTTCAGCAGCCTATTAATAAGCAGCGTAAGGGTTTATCTGAAAACCACCAGAAGACTCCACAATTGCAGAAAACACGCGGCAAAGGAGTGCCATATGACTGTGGATCATCTAGGAGAGGCTTAAGGGATCAGCAAGAATTTAAGGATGTATTTGAGGTTTCTGAGATTCCAAAGGTAGAGAGCAGTAGATATCCGTCGCCAGGGTGTGTAGACTTGAAGACCAATGATGCTGAAATGTCATTCATTGAACAGAAGTTCATGGATGCCAAACGCCTTGCAACTCATCAAGATTTACAGTCTTCAAAGGACTTCCGAGACACACTTGAGGTTTTGGATTCTAACAAGGATCTTCTGCTGAAATACTTTAAGCGGCCAGATTCTTTGTTTAAAAAGCATCTAAATGATCTTCAAGCTGTTCCTGTTCAATCACATTACAGACATGCAGAAACTATGGATATCGAGAAGTATGAAGATGACTTAAGTTGGAGGTCAGATAGGGAGAAAACACGGTTGAACTACAATAGATCTCATGAAAAGCATCTTGATGGTTATCCTTATCATTTTGACAAAAGACATGTGATGCATAGTTCACCAAAATCATCAAAGCTTCAATTTCAGGGCAGACATGAACAAGACGCAGTCCCCACAAAGATTGTCCTCCTGAAACCCAATCTTGGAAAAGTGCAGGGTACCAGAATTGCATCATCACCTTGTTCTCATAATTTTCTGTCGGGGCGTGAAGGAGACAGTGAACTGTGTCAAGTGACAAACTTGCCTGAAAGTGCAAGTTCTTGGAGGCAAGATTCTTTTGAATCTAGAGAAATTGCTAAGGAAATTACTAGGCAAATGAGAAATAGTCTTAACAATAGCGGCATGATGCTTTCAACTTCTAGAATTGCGGGATATGCTGGGGATGATAGTTCATGTAGTATTTCTGGTAATGAATCTCCTGACATATCTGGGGAAATAACTGCAACTTTGGGAAATTCATTCGACTTAAACAGTCGTAGCAGGCGATCATCCCATTCCGGTGAATCTTCTGTAAGTAGAGAGGCGAAGAAGAGATTGTCAGAGAGGTGGAAAATGACACACAAGTCTCAAGAGGTGGAGGGAATCAGCAGGAGTAGCACGCTGGCAGAAATGCTTTCTATCCCTGACAAAGACTTGAAGGCAGCAAATTTTGTTGGCACGGCTACTGGGGAAGGTTTCCATGATAAGTTTACTCCCAATAGTGAACCTGCTAAGTGGGTTGAACCATTGGGTATCAGCAGCAGGGATGGTTGGAAGGACGGCTGCATTGGTAGTTTGTCAAGGTCACAATCTCTTCCTTCTTCCTCCACTTCCTTTGGAAGTCCTAAAACATTCTTGCGCACTGAAGCACTTTGTTCTGATCGATATATGGTGCCGAAGGAAGGCCATAAACGTGAGAGGAGAAGAGCAGCAAAGAGTCTTGATCATAGACATGGTGTAAATAACAGAAGCCCAAGATCCGGTCACAAGAAGTCTTGGTCTTTGCATTCGTCAAAGCTAGAAGTAGATGAGTTTTGTGCTGACTTACATACAGTTCAGAATAAAATGAATATCATTCTTGAAGATTCGGCCAAGCTTGAAGTTCCAAGTGCAGTTGCTGATGATGACACGGAGGTGACAAATGAAAGCATAGTTGAGTCTTCTGAACCTTTGAATAAGGTGCTTCCTGAATTATCTTCTCATGTTCTGATTGAAGGCCATGGTGGTGCGGTTGGCAACAATTCAATACAGCAGGATCTATCAGCTGCGTCGCCTCATGGAAGTTCAGTCATCCATGAACCACCTGTTCCTGGACTAGAAACTTCTTGCTGTAAAGATGCTGATCAACCCAGCCCTGTCTCCATCCTAGAACCTGCTTTTACAGATGATCTGTCTTCTTGTTCTGAATGTTTTGAAAGTCTGAGTGCTGATCTACAAGGGCTGCGAATGCAACTCCAGTTGCTGAAGTTGGAATCTGATGACTATGCGGAGGGACCCATGAAAGTAAGTGATGAAGAGGGTGAGGAAGTATCTGCGGGAATGTCAGCAGCAGACAAAGGATTATGTAGAACAACTGAAGATAGCTGGGAATGTTCTTACATTATGGATGTCTTGTCCGAATCTGGCATTGATGGAATTCAGCTCGATACAATTTTAGAAGTTTGGCATTCCCTAGAATGCCCTGTGAGTCTTTCGGTGTTTGATGAACTTGAAAAAAGGTATAGTGACGGGACAACTTGTTCAAGGTCTCAAAGGAGATTGCTTTTTGACCATATAAATATAGGAATTCTCAAGATCAGTGAGCAATTCTCTTTCTCTAGATCAGCAATAAAAAATGCCATTGGTTCTAATTTGACCAAAAACGGGTTCCGAGATGGCCTTCTGAGGATGGTAGTGAACGAAGCAACAGTAAGTGATGGTGGCCAGGGGAATGTAGTGGTTGGGGAATCTGAGTGGATGGACCTTAAAGTTTACACTGATGGAATAGCCAGGGAAGTTGAGAGATCATTGTTAGATGATTTGGTGGCAGAGGTAATCAGTACCTAG 2841 0.4273 MFCDHTLGCLAIDAPRNKQVHRQRLPPNLSPDSCSGGGVAAEKDSFSHKFGWRSSKKLLGTPIKKLLDEEMSPKSESKRRSPGVIARLMGLDGLPFQQPINKQRKGLSENHQKTPQLQKTRGKGVPYDCGSSRRGLRDQQEFKDVFEVSEIPKVESSRYPSPGCVDLKTNDAEMSFIEQKFMDAKRLATHQDLQSSKDFRDTLEVLDSNKDLLLKYFKRPDSLFKKHLNDLQAVPVQSHYRHAETMDIEKYEDDLSWRSDREKTRLNYNRSHEKHLDGYPYHFDKRHVMHSSPKSSKLQFQGRHEQDAVPTKIVLLKPNLGKVQGTRIASSPCSHNFLSGREGDSELCQVTNLPESASSWRQDSFESREIAKEITRQMRNSLNNSGMMLSTSRIAGYAGDDSSCSISGNESPDISGEITATLGNSFDLNSRSRRSSHSGESSVSREAKKRLSERWKMTHKSQEVEGISRSSTLAEMLSIPDKDLKAANFVGTATGEGFHDKFTPNSEPAKWVEPLGISSRDGWKDGCIGSLSRSQSLPSSSTSFGSPKTFLRTEALCSDRYMVPKEGHKRERRRAAKSLDHRHGVNNRSPRSGHKKSWSLHSSKLEVDEFCADLHTVQNKMNIILEDSAKLEVPSAVADDDTEVTNESIVESSEPLNKVLPELSSHVLIEGHGGAVGNNSIQQDLSAASPHGSSVIHEPPVPGLETSCCKDADQPSPVSILEPAFTDDLSSCSECFESLSADLQGLRMQLQLLKLESDDYAEGPMKVSDEEGEEVSAGMSAADKGLCRTTEDSWECSYIMDVLSESGIDGIQLDTILEVWHSLECPVSLSVFDELEKRYSDGTTCSRSQRRLLFDHINIGILKISEQFSFSRSAIKNAIGSNLTKNGFRDGLLRMVVNEATVSDGGQGNVVVGESEWMDLKVYTDGIAREVERSLLDDLVAEVIST 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01710 946 MobiDBLite consensus disorder prediction 103 119 - -
Vian3g01710 946 Pfam Domain of unknown function (DUF4378) 796 942 IPR025486 -
Vian3g01710 946 MobiDBLite consensus disorder prediction 427 457 - -
Vian3g01710 946 MobiDBLite consensus disorder prediction 103 133 - -
Vian3g01710 946 MobiDBLite consensus disorder prediction 565 599 - -
Vian3g01710 946 PANTHER AFADIN 31 945 - -
Vian3g01710 946 Coils Coil 736 756 - -
Vian3g01710 946 Pfam Protein of unknown function (DUF3741) 178 222 IPR022212 -
Vian3g01710 946 MobiDBLite consensus disorder prediction 438 457 - -
Vian3g01710 946 Pfam DUF761-associated sequence motif 75 95 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01710 Vian-Chr3 19203113 19207549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01710 60 944 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 35.636 9.20e-128 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01710 - - ccaj:109788117 1304.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01710 3 19203113 19207549 Vian3g01710 3 19203113 19207549 ECH