Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01706 ATGAGAACAATTTGCTGGGAGCCAAAAACGCAGTCGTTCACCTTCTCCCGTCACACTTCGGCACCAAGTTCATCTCTATCCACAACACCTTCGACCAGCACCAAAGAAAACATGGTTTCCACTACCATAGAGGAAGCAGAAGCTCTGATACTAAAATGGGACCCTGAAACCTCCGCGTACGGAAGAGTAACCTCTCTCTTCTACAACGACAAAGCTGAGGCCATGCACTACATCCACTGCGTTAACCAGCTTCATGAAACCATGCACGCTTTGCTTGCACAGAACCCGTCTTCACGGAAACTCGTCCTCGCACAAAAACTTATGCAAATGGCCATGAAGAGGCTCCAGAAAGAGTTCTACCAGATATTATCCATGAGCCGGGCCCAACTCGATCCCGAATCCGTTTCCGCCAGATCCTCCACCACCTCTAGAACCTCTTTCTGTTCCGATAGCTACGATGAAGGCACGGCGGAAGACGACGTTCGCGATACAGGAGATTGTATCTCCAAAGTCGAACGCGTTTCCTCTGAAACCGTGGCGGTTCTCAAATCCATTGCCGACTGCATGGTTTCCAACGGTTACGGCAAGGAATGCGTCACCGTTTACACGACTATGAGAAAGTCGATCGTCGACGAAGGCGTGTATCGCTTAAGCGTGGAGGAATTGAGCGCTTCGAAGGTGAATAAGATGGACTGGGAAGTGCTCGAGTTGAAAATCAAGGGTTGGTTAGAGGCCGTTAAGATCGCCGTGAGGACGCTCTTCTCTGGAGAAAGGATCCTCTGCGATCAAGTCTTCGGTGCGTCACAATCCATCGCGGAAGCTTGCTTTGCCGAAATTTCGAGAAGCGGAGCCGCTCTACTGTTCGGATTCCCCGATCTCGTTGTGAGAACGAAAAAATCCCCGCCTGAGAAGATCTTCCGAATAATTGATATGTACGCCACGATCGCTTCACTGTGGCCGGATATTGAATCGATATTCTCGTACGATTCAACAACCGGGTCTAAATCTCAAGCCTACGCTCTGCTTCTCCGACTCTCTGAGTCCGTACGAACGAGTTTCTTTGAAATTGAGACCGCAATTCAGAAAGACTCTTCCAAAGCTATTTCAAAATTCGCAGGCGTTCACCCCCTGACTGTGCAAGTAATGAATCACTTGTCTACACTCGCTGATTACAGCAACGTGCTATCTGAAATTTTCTTCGACGTGCCGCCGCCATCGAGGTCGCCGTTACCGGAATCTTACTTGTACAGTCCACAATCTGACAACTCCACGACAACGGCGACGGAATTCTCGGTGCAGATGGCGAGGCTGATTCTAGTCCTTCTTTGCAAGATCGACGGCAAGTCGAGGCATTGCAAGGAGGTTTCGTTATCTTACCTGTTTCTCACAAACAATCTCCGGCACGTGGTAGCCAAGGTCCGAACCTCGAACTTGATTTACGTTGTCGGCGACGACTGGGTTTTGAATCATGAGGCAAAGGTGAAGAAGTTGATGGCAAACTACGAGAGAGTAGCATGGGGCAAAGTGCTTTCGTCTTTGCCGGAAAATACAGCGGCGGAAATGTCGCCGGCGGAAGCGAGGGTTATGTTCGGGAATTTCAATTTAGAATTCGAGAAAGCTTACCGGAAAGAGAACGCGTTTAACATTCCGGAGCAGGAATTTCGTGAAGAGACGAAGGCGTCACTCGCGAGAAAAATAAGCCCTATGTACCGCGAGATGTATGAAACGCTCCGTAATTCAGTGGGATCGGTGAGGGAAATGAGAGACCATGTCATATTTACCCCTGAAGATGTTGAGAATTACATGCTGAACCTTTTTCCCGCGGGAAGATCAAGCTCCACTGAAGAAAACAGTTCATTTTTTGTAAGAAAAAAATTCTGTAAGAAATGCAAATGA 1896 0.4858 MRTICWEPKTQSFTFSRHTSAPSSSLSTTPSTSTKENMVSTTIEEAEALILKWDPETSAYGRVTSLFYNDKAEAMHYIHCVNQLHETMHALLAQNPSSRKLVLAQKLMQMAMKRLQKEFYQILSMSRAQLDPESVSARSSTTSRTSFCSDSYDEGTAEDDVRDTGDCISKVERVSSETVAVLKSIADCMVSNGYGKECVTVYTTMRKSIVDEGVYRLSVEELSASKVNKMDWEVLELKIKGWLEAVKIAVRTLFSGERILCDQVFGASQSIAEACFAEISRSGAALLFGFPDLVVRTKKSPPEKIFRIIDMYATIASLWPDIESIFSYDSTTGSKSQAYALLLRLSESVRTSFFEIETAIQKDSSKAISKFAGVHPLTVQVMNHLSTLADYSNVLSEIFFDVPPPSRSPLPESYLYSPQSDNSTTTATEFSVQMARLILVLLCKIDGKSRHCKEVSLSYLFLTNNLRHVVAKVRTSNLIYVVGDDWVLNHEAKVKKLMANYERVAWGKVLSSLPENTAAEMSPAEARVMFGNFNLEFEKAYRKENAFNIPEQEFREETKASLARKISPMYREMYETLRNSVGSVREMRDHVIFTPEDVENYMLNLFPAGRSSSTEENSSFFVRKKFCKKCK 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01706 631 MobiDBLite consensus disorder prediction 16 36 - -
Vian3g01706 631 Pfam Exo70 exocyst complex subunit 242 603 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vian3g01706 631 SUPERFAMILY Cullin repeat-like 42 606 IPR016159 -
Vian3g01706 631 Gene3D Exocyst complex component Exo70 63 615 - -
Vian3g01706 631 PANTHER EXOCYST COMPLEX PROTEIN EXO70 31 606 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01706 Vian-Chr3 19140674 19142569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01706 42 606 EXO70 exocyst subunit family AT3G09520 50.960 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01706 K07195 - gmx:100798477 943.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01706 3 19140674 19142569 Vian3g01706 3 19140674 19142569 ECH
Vian3g01706 3 19140674 19142569 Vian2g02301 2 43382809 43389555 PCT