Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01697 ATGATGCCATTGACGCCTGATCAGTCTAGCAAGAAAGTTGGGTCCGGTATGACGGCTTCTCCGTCGCCGTTTCTCACACCTCGCCCGGAACGACGCCGTCCTGATTCACGAGGTTCTGAATGGTGCCCCAATCGTCAGGACAAGGACAAAGAGACTAACGTCCAAGTTTTGCTTCGATGCAGGCCATTTAGTGAAGATGAGCTCAGATCCAACGTTCCCAGGGTGGTGACATGTAGTGAAAACAAAAGGGAAGTTACTGTTATGCACACTCTAGGTAACAAGCAAGTAGATAGAGTTTTCACCTTTGATAAGGTTTTTGGACCTAAAGCACAGCAAAGATCAATATACGAGCAAGCAATTGCCCCAATTGTGAATGAAGTTCTCGATGGTTTCAATTGCACTGTTTTCGCATATGGCCAGACAGGTACTGGCAAAACTTATACAATGGAAGGTGGCATGCGAAATAAGGGTGGTGATTTACCTGCTGAGGCTGGTGTAATTCCAAGAGCAGTGCGTCAAATTTTTGATATTTTAGAAGCACAGAATGCCGACTATAACATGAAAGTGACATTCCTTGAGCTTTATAATGAAGAGATAACCGATTTGTTGTCCCCAGACGAGAATTCTAGGCCTACCGAGGAAAAACAGAAGAAACCTATAACCCTTATGGAAGATGGAAAGGGCTGTGTGTTTGTGAGAGGCCTTGAAGAAGAATCAGTTTACAGCGTCAATGAAATTTACACTCTATTGGAACGAGGAGCGTCCAAAAGGCGCACTGCAGAAACTTTGCTCAACAAGAGAAGCAGCCGTTCTCATTCAGTCTTCACCATTACTGTGTATGTAAAGGAGACAGTGATTGGCGACGAGGAGTTGATTAAATGTGGCAAGCTCAATCTCGTCGACTTGGCAGGATCAGAAAATATAATGCGTTCAGGAGCACGTGAGGGGCGTGCTAGAGAAGCAGGGGAGATAAACAAGAGCTTACTCACCCTGGGACGTGTCATAAATGCACTTGTGGAACATTCTGCTCATGTGCCTTACAGAGACAGTAAGCTTACAAGGATTTTGCGAGACTCCCTAGGAGGGAAAACAAAGACATGCATAATTGCTACTATTTCTCCTTCTGCTTATTGTATGGATGAAACACTAAGTACACTAGACTATGCTAGTCGTGCAAAAAGCATAAAGAATAAGCCTGAGGCAAACCAAAAGGTTTCAAAGGCCGTTTTGCTGAAGGACTTGTACATAGAAATTGAGAGGATGAAAGAAGATATTCGAGCAGCAAGGGAAAAGAACGGTGTATATATTTCTCATGAAAGATTTGCCAAGGAAGAAACAGAAAAGAAGGAAAGGAATGAGAAGATAGAGCAATTAGAGAATGACCTTGGCCTAAGTGAGAAGCAAGTGGAGAGCTTCCGTGAGCTCTATTTAACAGAGCAAGAACAGAAACTGGATTTAGAAAGAGAGCTTAAGGATTGCAAGGGGAATTTGGAAAAAACCAGAAACACCTTACATGATCTCCAAGAGAACTACAAGCAAGTAGTTTCAACCTTGAAGGAGAAGGAATACACCATTTCCAAGCTAATGAAGTCAGAAACTGCCTTGATTGATCGTGCGAAGGAAATGTGTACTGATCTGAAGAATGCATCTGATGATATTAATTCACTGTCCTCAAATTTGGATCACAAAGAAAGATTGGAGGCAGAAAATAAAAAAATAATTTTGAATTTTGGGTCTCTCCTAAATGAGAGCTTAAAGGACTTGCATACAACCATTATGGGATCAGTTTCTCAACAACAGAAACAACTTAAAAGTATGGAAGACCATGTCAGCTCCTATCTTGCCAGTAAAAGTGATGCTGCACAAACTCTAGAATCAAGGATCAAGAAAATGACGGGAATTTACACTTCAGGGGTAGAGACCATGAAGGAGCTAACTAATACATTGCACATGAAAGCTACATCGGATGTGGAACTGATGCAATCTAAAGTGTCATCACAAACATTGGCAGTTGAAAATTTTCTTGCCACTGCTGTTTCTGAAGCCAAGGATGTTATATGCAACATCCAGAATTCTATTGATGAGCAAAAGCAGCTGCTAGCATTCTCACTTCAACAGCAAGAGCAAGGATTGCAACGAAGCATAGCTTCAGCACGAGTCGCTTCAGAGGCTGCTATAAACTTTTTTAATGACATTCATCTACGTTCTTCAAGTGTCATGAAAGTTCTTGAAGAAACTCAAAATGAGAGGTCCGAGCAGTTAGCTAACTTTGAGAAGAAGTTTAAGGAAGAGGTTGAGAGAGAGGAGGCACAGGCCTTACAGAAAATTGCAGCGATTTTGGGAACCATGACATCTAATAGGACGGTTATGGTCAGTCGAGTCTCAGAGGCATCAAGGAATATCAAGGACACAAGCATGCAACAGTCCAAGAGATTACAGCTAGAGATGCTCAACATGCAGCAAGTTTCAAAAGATGGTACCAAGGAAGTTAGTGGGTATGTAGAGAACGTGAAAAGTCACTTTGTGGAGCAAATATTCTCGGCCAGTGATATTAATACTACCATGGAGAATTGCCTCCTTGAGTGCTCAAAGACTGTAGAGTGTTCTAGGAAGCAGTGGGAAAGTGCCAACTCGTCCTCCTGTAATCTCCTCAAGAACAATCTTGCAGAGATAGAATCCACAGTGAAGGAAAACATCTTATCAAATCATGCTCTTAAGCAAGAATTTGTGTCTGCATCATTGTCTATGGATTCAGATTATGATGCAGTAACACGCACCCTGCTGGCAGATGTAAATGGTGCACTGATGATGGACCATGAGAATAAGAAGGCAATTGATTCCATGACCACAAGGTGGTTGGAGCAGCTTAACTCATTGCAAGATAAGCATGGCCAAGATGTATCAAATATCCATGTTCAAGCAGAAAAAAGCCTGGTTAAAGATTACTTGGTTGATCAGAATGAAAGATCTCAGAAAAGAATTATATCAGTTCCCAGCCCGGCTTCCTTTGAGGAGATGAGAACACTGATCACAGAAGACAAGTCCACCGAGAACTCGCCGAAATTAATTCATGCAGAAAGCAAAACTCCAAATCGAACTCCTTTTGCAGACCCTCAAAGTGTTTTGCCACATAACCACGTTCAATTAAACATGGTAGCCGTTCTGAAGAGACAGAGAGAAAACGAATCAGAGGAGTTCCAGTGCAAGACGTGTAACCGGAAATTCTCGTCGTTCCAAGCGCTGGGAGGTCACCGGGCGAGCCACAAGAAGCCCAAGTTGGAGGGAGAAGAGGGCAAGGATCTGAGCCGGAAGCCCAAAACCCACGAGTGTTCGATTTGCGGGCAGGGATTCTCGTTGGGCCAGGCCCTGGGAGGGCACATGAGAAAACACAGGGGAGGCATGAACGAAGGGTTTTCTTCAGTTATTGCGGAGGCACCGCTTCTGAAACGTTCGAATAGCAGCAAGAGGGTGATGTGCTTGGAGTTGGATCTCAACCTAACGCCGTTGGAAAATGACTTGAAGTTGTTGTTCGGAAACAAGGCTCCTACGGTGCATCTTTCCTTGTAG 3567 0.4331 MMPLTPDQSSKKVGSGMTASPSPFLTPRPERRRPDSRGSEWCPNRQDKDKETNVQVLLRCRPFSEDELRSNVPRVVTCSENKREVTVMHTLGNKQVDRVFTFDKVFGPKAQQRSIYEQAIAPIVNEVLDGFNCTVFAYGQTGTGKTYTMEGGMRNKGGDLPAEAGVIPRAVRQIFDILEAQNADYNMKVTFLELYNEEITDLLSPDENSRPTEEKQKKPITLMEDGKGCVFVRGLEEESVYSVNEIYTLLERGASKRRTAETLLNKRSSRSHSVFTITVYVKETVIGDEELIKCGKLNLVDLAGSENIMRSGAREGRAREAGEINKSLLTLGRVINALVEHSAHVPYRDSKLTRILRDSLGGKTKTCIIATISPSAYCMDETLSTLDYASRAKSIKNKPEANQKVSKAVLLKDLYIEIERMKEDIRAAREKNGVYISHERFAKEETEKKERNEKIEQLENDLGLSEKQVESFRELYLTEQEQKLDLERELKDCKGNLEKTRNTLHDLQENYKQVVSTLKEKEYTISKLMKSETALIDRAKEMCTDLKNASDDINSLSSNLDHKERLEAENKKIILNFGSLLNESLKDLHTTIMGSVSQQQKQLKSMEDHVSSYLASKSDAAQTLESRIKKMTGIYTSGVETMKELTNTLHMKATSDVELMQSKVSSQTLAVENFLATAVSEAKDVICNIQNSIDEQKQLLAFSLQQQEQGLQRSIASARVASEAAINFFNDIHLRSSSVMKVLEETQNERSEQLANFEKKFKEEVEREEAQALQKIAAILGTMTSNRTVMVSRVSEASRNIKDTSMQQSKRLQLEMLNMQQVSKDGTKEVSGYVENVKSHFVEQIFSASDINTTMENCLLECSKTVECSRKQWESANSSSCNLLKNNLAEIESTVKENILSNHALKQEFVSASLSMDSDYDAVTRTLLADVNGALMMDHENKKAIDSMTTRWLEQLNSLQDKHGQDVSNIHVQAEKSLVKDYLVDQNERSQKRIISVPSPASFEEMRTLITEDKSTENSPKLIHAESKTPNRTPFADPQSVLPHNHVQLNMVAVLKRQRENESEEFQCKTCNRKFSSFQALGGHRASHKKPKLEGEEGKDLSRKPKTHECSICGQGFSLGQALGGHMRKHRGGMNEGFSSVIAEAPLLKRSNSSKRVMCLELDLNLTPLENDLKLLFGNKAPTVHLSL 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01697 1188 Pfam Kinesin motor domain 59 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian3g01697 1188 Pfam C2H2-type zinc finger 1066 1091 - -
Vian3g01697 1188 Pfam C2H2-type zinc finger 1108 1131 - -
Vian3g01697 1188 ProSitePatterns Zinc finger C2H2 type domain signature. 1068 1088 IPR013087 -
Vian3g01697 1188 FunFam Kinesin-like protein KIN-5D 49 427 - -
Vian3g01697 1188 Coils Coil 740 760 - -
Vian3g01697 1188 ProSitePatterns Kinesin motor domain signature. 295 306 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vian3g01697 1188 ProSiteProfiles Zinc finger C2H2 type domain profile. 1066 1093 IPR013087 -
Vian3g01697 1188 MobiDBLite consensus disorder prediction 1087 1107 - -
Vian3g01697 1188 ProSiteProfiles Zinc finger C2H2 type domain profile. 1108 1135 IPR013087 -
Vian3g01697 1188 Gene3D Kinesin motor domain 48 437 IPR036961 -
Vian3g01697 1188 MobiDBLite consensus disorder prediction 1 48 - -
Vian3g01697 1188 Coils Coil 483 517 - -
Vian3g01697 1188 Gene3D Classic Zinc Finger 1063 1130 - -
Vian3g01697 1188 ProSiteProfiles Kinesin motor domain profile. 53 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian3g01697 1188 SUPERFAMILY beta-beta-alpha zinc fingers 1066 1130 IPR036236 -
Vian3g01697 1188 PRINTS Kinesin heavy chain signature 130 151 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian3g01697 1188 PRINTS Kinesin heavy chain signature 345 366 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian3g01697 1188 PRINTS Kinesin heavy chain signature 262 279 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian3g01697 1188 PRINTS Kinesin heavy chain signature 296 314 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian3g01697 1188 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 435 IPR027417 -
Vian3g01697 1188 MobiDBLite consensus disorder prediction 1 22 - -
Vian3g01697 1188 PANTHER KINESIN-LIKE PROTEIN KIF11 48 1018 IPR047149 -
Vian3g01697 1188 Coils Coil 411 431 - -
Vian3g01697 1188 CDD KISc_BimC_Eg5 51 404 IPR047241 -
Vian3g01697 1188 MobiDBLite consensus disorder prediction 1082 1107 - -
Vian3g01697 1188 SMART c2h2final6 1066 1088 IPR013087 -
Vian3g01697 1188 SMART c2h2final6 1108 1130 IPR013087 -
Vian3g01697 1188 Coils Coil 441 475 - -
Vian3g01697 1188 ProSitePatterns Zinc finger C2H2 type domain signature. 1110 1130 IPR013087 -
Vian3g01697 1188 MobiDBLite consensus disorder prediction 28 48 - -
Vian3g01697 1188 Coils Coil 546 566 - -
Vian3g01697 1188 SMART kinesin_4 51 403 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01697 Vian-Chr3 19007924 19016131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01697 42 425 Miscellaneous Gene Families AT5G06670 35.641 8.44e-62 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vian3g01697 Kinesin 4.9e-118 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01697 K10398 - gmx:100794302 1714.51