Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01694 ATGTCGTTCCATAATCAAGCATTTTGGATGGGAAAGGGTCCTGAATGTTTGAATGATGGTGACATGGCAAATGACAATTCTTCTAGAATTGATTCCAAGCGTGCTTGTTCATGGTTCATGGATGACCCTGATGTGGATCTGCTTCCCAATAAGAAACAAGCAGTAGAAGCTCCAAACAATTTGTTATCTGGAATTCTCAACTCGAATGTTCCTTCCTGGGGAAATTCCTCAGGATTTCACTCCTTAAATGGCCATTTTGCCGAACAAGTATTTGCCCCAGATGCTGTAAATATGCCTTTTGAAGATGCAAATACTCCCTCTGTTAGCATAGATGACAAGCTGAGTGTGGAAAGAAAGGATAATATGGACCCCTTTGGGAGTGGATCCTCGTTTGGTTTATCCATATCAACTGCATTAGAAGATCCTCGTTTAGTTTTTAACTATGATGGAATTAGAAAAGTCAGAGTAAACGAGGTGAAGGGATCCGAGAATGTCATGTCTGTTACTGCAAACAGTCCCTATGATAGAGGAGTCAGTGACCCTTTGTCAAATCCTTGTCTATACAAGGCTGGTGATAATTCCATATCAACAAATCTCAACTATAACAAAGGGGGAGCCAATATGATAGCAATGGATGGTTCCTATGACAGGACTGATAACAATTTCATGTCAATGGGTCAATCCTATGACAAGGGAAATGACAGCTTATCTGTACATCCAACATTCAATGATATTTGTAATACGATATCAATGGATGATAGAAATCTAATATCTATTGCTCAAGCTTACAATAAGGGTCATGGCAATTCTATGTTAACCAACCAGCTATACAATAAGGTCGACAATGGCACTATGTCATCTCATTACAACTACCACAAGGAGGGTAATGATGTGCCATTCGTTCCACGATCCTATGATAAAGGAGAGAGCACTATCATATGTTTCGGTAACCGTGAGGATGACACTACTTCCTCAGATTTGTTTATTTCTGACTATGAACTGTTGATGTGTCAAGCTCTTTCACACAAGTCAGAAGCTGTGAAAGAGAAAGAGTTGGTTGCATCTAGTTCTAATTTACTTTCAAGTACAACACAGACATCTGCACCTGCAACTGAAAATATTCTCAGGACAAAAGAGGAGATAAAAGTGTCTAAGAGGGCTATTTCAAACAACTTCCCTTCAAATGTCAGAAGTTTGCTATCCACTGGTATGCTGGATGGTCTCTCAGTAAAGTATAAGGCGTGGTCACGGGAGAAGGAACTTCGAGGTGTTATAAAAGGTGCTGGGTATCTGTGCAGTTGTCACTCATGTAATTTTTCCAAGGTTATTAATGCATATGAATTTGAGCGACATGCTGGTTGCAAGACAAAACACCCCAATAATCACATTTACTTTGATAATGGGAAAACTATTTATGGGGTTGTACAAGAGCTTAGGAGCACTCCAAAGAGCATGCTGTTTGAAGTTATTCAGACTGTAACTGGCTCAGCTATCAATCAGAAATCCTTCTGCATTTGGAAAGAATCTTTTTTGGCTCAAGCAGCAGGGAACTCCAGCACATATGTGCAAAGCAAGTAA 1578 0.398 MSFHNQAFWMGKGPECLNDGDMANDNSSRIDSKRACSWFMDDPDVDLLPNKKQAVEAPNNLLSGILNSNVPSWGNSSGFHSLNGHFAEQVFAPDAVNMPFEDANTPSVSIDDKLSVERKDNMDPFGSGSSFGLSISTALEDPRLVFNYDGIRKVRVNEVKGSENVMSVTANSPYDRGVSDPLSNPCLYKAGDNSISTNLNYNKGGANMIAMDGSYDRTDNNFMSMGQSYDKGNDSLSVHPTFNDICNTISMDDRNLISIAQAYNKGHGNSMLTNQLYNKVDNGTMSSHYNYHKEGNDVPFVPRSYDKGESTIICFGNREDDTTSSDLFISDYELLMCQALSHKSEAVKEKELVASSSNLLSSTTQTSAPATENILRTKEEIKVSKRAISNNFPSNVRSLLSTGMLDGLSVKYKAWSREKELRGVIKGAGYLCSCHSCNFSKVINAYEFERHAGCKTKHPNNHIYFDNGKTIYGVVQELRSTPKSMLFEVIQTVTGSAINQKSFCIWKESFLAQAAGNSSTYVQSK 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01694 525 PANTHER AUTOIMMUNE REGULATOR 8 477 - -
Vian3g01694 525 Pfam Tify domain binding domain 423 478 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01694 Vian-Chr3 18942282 18944932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01694 373 510 PHD Transcription Factor Family AT3G53680 54.348 3.98e-43 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01694 - - gmx:100794765 808.135