Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01693 ATGGAGAACCAGCAGAAGCAAAATTGGTTCGAAAAGGCAAAGCCATTCGCAGCAGTGGTATCAATTCAGTTTGGATACGCAATCATGGATGTTATATCCAAAGCTGCACTCAACAAAGGGATGAGCAATTATGTGTTCGTCGTTTATCGCCAAGCAGTTGCATTCCTTGTCATGGCTCCTTTGGCATGGTTTTTTGAGAGGAAAGCAAAGCCAAAGATGACTCTCTCAATTTTCATCAAGATTTTGGTGCTGAGCTTGATAGAGCCAGTTATTGACCAGAATCTGTATTTTTTGGGGATGAAGTACACAACAGCAACCTTTGCCGTTACCATCACCAATATGCTTCCTGCTATCACCTTTATCTTCGCTTGGATTCTTAGGCTTGAGCAAGTAAATATAAGAAGTATACGAAGCCAAGCGAAGGTGGTGGGAACTGTAGCAACTGTTTCGGGTGCCATGATCATGACACTGATTAAAGGGCCAGTGCTTTTTGGGTCACACGGAGGCAATGATCAAAGCCAGTATAATGGCACAAGTACTCAACATACAATCATAGGGTTCATATTGATGACTATTGGATGCTTTTGCTGGGCTTCTTTCGTGATCTTGCAGGCTATTACTCTGAAAACCTACCCTGCTGCACTCTCTCTTTCTGCTTGGATATGCTTAATGGCCACAGTTGAAGGTGCTGCAGTGGCTTTGGTCATGGAAAGGGGCAACCCTTCAGTTTGGTCTATAAAATTTGATATGAGATTGCTCTGTGCTGTTTATTCTGGCATAACATGTTCGGGATTGGCTTATTACTTGCAAGGAGTGGTGATGAAAAGTAAAGGCCCAGTGTTCGTGACAGCATTTAATCCTCTGGGCATGGTAATCGTGGCTATCATGGGCTACTTCCTTCTGGCTGAGCAAGTTTTCCTTGGAAGAATGACTGGTGCCGTCATCATTTGTTTGGGCCTATACTTTGTGGTGTGGGGAAAAAGCAAAGACAATTATGGCCCAGAAGACCCAAATACTCAAGAGCCCATAGAGATGGAAAGTGCTAAGAAGGAAAATTTCACTTGCTGCACTCATGGAGTCACCACTGCTACCAATTTAGGAAATGGAAACACAACTCCAAGTGAAGAACAAGTGTGA 1137 0.4354 MENQQKQNWFEKAKPFAAVVSIQFGYAIMDVISKAALNKGMSNYVFVVYRQAVAFLVMAPLAWFFERKAKPKMTLSIFIKILVLSLIEPVIDQNLYFLGMKYTTATFAVTITNMLPAITFIFAWILRLEQVNIRSIRSQAKVVGTVATVSGAMIMTLIKGPVLFGSHGGNDQSQYNGTSTQHTIIGFILMTIGCFCWASFVILQAITLKTYPAALSLSAWICLMATVEGAAVALVMERGNPSVWSIKFDMRLLCAVYSGITCSGLAYYLQGVVMKSKGPVFVTAFNPLGMVIVAIMGYFLLAEQVFLGRMTGAVIICLGLYFVVWGKSKDNYGPEDPNTQEPIEMESAKKENFTCCTHGVTTATNLGNGNTTPSEEQV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01693 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 147 - -
Vian3g01693 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 222 329 - -
Vian3g01693 378 Pfam EamA-like transporter family 185 324 IPR000620 GO:0016020
Vian3g01693 378 Pfam EamA-like transporter family 23 136 IPR000620 GO:0016020
Vian3g01693 378 PANTHER WAT1-RELATED PROTEIN 14 338 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01693 Vian-Chr3 18939073 18941756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01693 1 375 Nodulin-like Gene Family AT2G37460 58.639 1.10e-155 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01693 - - gmx:100813408 587.03