Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian3g01685 | ATGGGAGAAGAAGCGGTTTGTGTGCATGCATTAGATGAAGGAAGGAAGGAAAACAATGAGGAATCAAAGACGGAACTGAAGCGTGACTACGACCAATGCGTTAGTGATACTGAACGCCACTTGTTTCCTCATAAGAAACAAGTTAAGGAAGTTTCGAACGATGAAGTGCGCTCTGAGGTTTCTAATCCCAACGTTTCTGCAGTAGAGCATGCGCTAACTTTTCAAGATATCAGTAGCCAACCAACTGAATCCACGGACGTTAACCATGCGGAATGTGGAGAACTGACGTCTACTTGTTTGGAGAATTCCAGTTCTGATGAGACCTTGAGTGATGAAGCTGGTGATCTGAATATTACTACTACTACAAATAATAATAATAACAACAACAACAATACTTCTCAGAGTGACAAGAACACGAGTAGTGCTGCAATGACATCCTGTGTTGTGATGGAAATTCCCAAGCATGCTAGTTCCTCTGGGATCAGGAAGATTACTTTTAAGTTTAGTAAAAAGAAAGAGGACTATGGTTACCAGCCACCTGCTCCTGTGCACCGTTACACTGATGGCAGTCACATTGGTTTTCATGCGGTTGATGAATATTTGGCAAGGGATTATTGTAGTGGTGGGTTGGTAGAAAGCATGGGATATGCTCACGATGGAGATTTGGAGTCGTACGCTCGCAATATGGAATTGAAAATGTCCAAGAAAGTAGTTCCCAACTGTTACCCTACAAATGTCAAAAAGCTTTTATCAACTGGCATCCTTGACGGAGCTGTAGTGAAGTATATTTATAATCCTGGAAAGGTTGAGCTACAGGGGATTATTGATGCTGGTGGATATTTGTGTGGCTGCTCAATGTGCAATTACTCTAGAATTCTTAGTGCCTATGAGTTTGAGCAGCATGCCGGGGCCAAGACTAGACATCCAAATAATCATATTTTCTTAGAAAATGGAAGACCAATATATAGTATTATACAGGAAATAAAAACGGCTCCACTCAGTATATTAGACGAGGTTATCAAGAATGTGGCTGGTTCCTCTGTCAATGAGGAGTCTTTCCAGGTTTGGAAAGAAAGTCTTCTACACAGCAACGGCAAGGTTCAGGCTTATAAAAATTCTAGCGCCAAACTTGTTGGCATGTCTCATACAAAACTAAGTCAATCCGTAGATAGTACTAGCCACTTGTCGTCTTTGCATGTGCCAAGTCATTATGAGCAGCTCAAGTATATGAATCAGACAAATGACGAATGGAAACGTGTGATGAAAAAGTCAAGCTCCTATTCTTCTAATTCTGGTGTACTGCTGAAAAGAAGTGCTGATGGTTGCACTAAGAGAAGGGACAATGATTTGCACAGGTTACTTTTTATGCCAAATGGGCTACCAGATGGTGCTGAGTTGGCTTATTATGTCAAAGGACAGAAATTACTTGGAGGTTACAAACAGGGAAGCGGTATAGTCTGTGGTTGTTGTGATATTGAGATAAGCCCTTCACAGTTTGAAGCCCATGCTGGAATGGCTGCTAGGCGTCAACCTTATCGGCACATATATACTTCCAATGGGTTAACACTTCATGATATAGCTCTCTCATTGGCAAATGGTCAAAACCTTACCACGGGAGACAGTGATGATATGTGTGCAGTATGTGGAGATGGAGGAGATTTGATTCTTTGTAATGGATGCCCTAGGGCCTTTCATACAGCCTGCTTGGGTTTACAGTGTGTTCCAGACAGTGGTTGGCAATGTCTAAATTGCGGAGATAGTGCTGGTAATGGAAGAGAATCTTCTCTTGTGAGGCCAATCATGATCCGGTTGACACGAGTTGATAAAACACCAGATTTTGAAATGGGTGGATGTGTTGTTTGCAGGGAACATGATTTCAGTGTTGCAAAATTTGATGAGCGAACGGTAATAATTTGTGACCAGTGTGAGAAGGAGTATCATGTTGGCTGCTTGCGGGACATTGGGCTATGTGAGTTGGAAGAGCTGCCCAAGGATAAGTGGTTTTGTTGCAGTGACTGCAATCGAATATATGTGGCTCTACAGAATTCAGTTTCTGCTGGAGCAGACAATATACCAGCTTCCTTGTCAGAACTAATAATCAGGAAGCACGAGGAGAAGGGACTATGTACCTATGGTTCCACAGATGATATTCAGTGGAGAATTTTAAGCGGAAAAAGCCGTTATCCGGAACATTTACCGCTGCTTTCAAGAGCTGCTGCAATTTTCCGAGAGTGTTTTGATCCCATTGTTGCAATATCTGGCCGTGATCTGATTCCGGTTATGGTCTATGGGAGAAATATTTCTGGCCAAGAATTTGGGGGGATGTATTGCATTGTTTTAATAGTGAATTCTGTTGTAGTATCAGCTGGGCTTCTGAGGATTTTTGGCCGTAATGTTGCTGAGCTTCCACTCGTTGCTACTAGCAGAGTACATCAAGGAAAAGGATATTTCCAAGTGTTGTTCTCTTGCATAGAGAGGTTGCTGTCTTCTCTAAACGTAGAAAAGCTGGTGCTTCCTGCAGCAGGGGACGCAGAGTCAATTTGGACTAAGAAATTGGGCTTCCGAAAGATGAGTGAAGATCAGTTATCCAAACATCTCAGAGAGGTGCAGCTAACTCTCTTCAATAAAACTTCAATGCTGGAGAAGACAGTTCAGCAGACTATAGAATGA | 2670 | 0.4232 | MGEEAVCVHALDEGRKENNEESKTELKRDYDQCVSDTERHLFPHKKQVKEVSNDEVRSEVSNPNVSAVEHALTFQDISSQPTESTDVNHAECGELTSTCLENSSSDETLSDEAGDLNITTTTNNNNNNNNNTSQSDKNTSSAAMTSCVVMEIPKHASSSGIRKITFKFSKKKEDYGYQPPAPVHRYTDGSHIGFHAVDEYLARDYCSGGLVESMGYAHDGDLESYARNMELKMSKKVVPNCYPTNVKKLLSTGILDGAVVKYIYNPGKVELQGIIDAGGYLCGCSMCNYSRILSAYEFEQHAGAKTRHPNNHIFLENGRPIYSIIQEIKTAPLSILDEVIKNVAGSSVNEESFQVWKESLLHSNGKVQAYKNSSAKLVGMSHTKLSQSVDSTSHLSSLHVPSHYEQLKYMNQTNDEWKRVMKKSSSYSSNSGVLLKRSADGCTKRRDNDLHRLLFMPNGLPDGAELAYYVKGQKLLGGYKQGSGIVCGCCDIEISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIALSLANGQNLTTGDSDDMCAVCGDGGDLILCNGCPRAFHTACLGLQCVPDSGWQCLNCGDSAGNGRESSLVRPIMIRLTRVDKTPDFEMGGCVVCREHDFSVAKFDERTVIICDQCEKEYHVGCLRDIGLCELEELPKDKWFCCSDCNRIYVALQNSVSAGADNIPASLSELIIRKHEEKGLCTYGSTDDIQWRILSGKSRYPEHLPLLSRAAAIFRECFDPIVAISGRDLIPVMVYGRNISGQEFGGMYCIVLIVNSVVVSAGLLRIFGRNVAELPLVATSRVHQGKGYFQVLFSCIERLLSSLNVEKLVLPAAGDAESIWTKKLGFRKMSEDQLSKHLREVQLTLFNKTSMLEKTVQQTIE | 889 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian3g01685 | 889 | ProSitePatterns | Zinc finger PHD-type signature. | 545 | 584 | IPR019786 | - | |
| Vian3g01685 | 889 | SUPERFAMILY | FYVE/PHD zinc finger | 614 | 671 | IPR011011 | - | |
| Vian3g01685 | 889 | MobiDBLite | consensus disorder prediction | 101 | 142 | - | - | |
| Vian3g01685 | 889 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 532 | 610 | IPR013083 | - | |
| Vian3g01685 | 889 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Vian3g01685 | 889 | ProSitePatterns | Zinc finger PHD-type signature. | 618 | 673 | IPR019786 | - | |
| Vian3g01685 | 889 | PANTHER | AUTOIMMUNE REGULATOR | 16 | 883 | - | - | |
| Vian3g01685 | 889 | FunFam | PHD zinc finger protein | 616 | 676 | - | - | |
| Vian3g01685 | 889 | ProSiteProfiles | Zinc finger PHD-type profile. | 542 | 587 | IPR019787 | - | |
| Vian3g01685 | 889 | FunFam | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein | 532 | 610 | - | - |
Showing 1 to 10 of 20 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vian3g01685 | - | - | gmx:100808999 | 1586.62 |
Showing 1 to 1 of 1 entries