Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01638 ATGGGTAGCAACTTGCACCGACTGCTCAGAAGCTTCTGTTTGGGTACTGATTGGAAGTATGCCATCTTTTGGAAGCTCAAACACCGGGCTCGGATGATCCTGACATGGGAGGATGCTTACTATGACAATCCCAATATTTGTGACTCTTCTGGAAATAAGAGCTGCCAGAATACATGGGAGCAGATTGACAGTGCAGATTTTTCGCATGATCCTCTAGAGTTAGCTGTGGCAAAGATGTCATATCATGTATATTCGTTAGGGGAAGGAATTGTTGGACAGGTAGCTGTTACAGGAAAACATCGGTGGATATATGAAGACAATCAAGTTACAAGCTCTGGCCCATCTTTAGAGATTGCTGATGGATGGCAATCTCAATTTTCTGCTGGAATTAGGACCATTGTTGTTATAGCCGTAGTCCCCATTGGAGTTGTTCAACTTGGTTCCTTGAATAAAGTTGCTGAAGATATGGGGGTTATAACCTGTATCCGAAGTCTCTTTTTGTCTAATCAAGATTACACACTCCACCATGATCCTAATCAAGTACAAAATAGTCTGAAGAATTCTTCGTCTCTGTTGGATTCAAAAGCTTCAGAAAGTGTGCCTGCTCACTTGCACAATACAGAGAAAACCATGAAGCATGAATCACTGGATAATTTAATGCCCTTTCAAGGTCCTGGGAACAATTATTCACCTCATGCTGTGAATCAGAAGATGACTGTTGATGTGGCCAAGCATGAAGGGCCAGAATTATACAGTGATGGAAATTTCATTTTGCTTCAGTCAATGTCTAATATGATGAATGTGGAGCAGCATAAATTTTTAGGGATGAGACCTATAAATGAGAGAAATTTTGAATGGAACAGTAGTGGCTGTGATGATACAAGTGTGGAATCAGGAAAAAAATTGTCATCTTTTTTACATAATTTGGTTACGGGTAATAATGGTGTCAATGATTTAGTATGTCCATCCAAAATTGTTGGATTTGATTCTGTATCCTTCTCCTCAGAATTTCTTGATACAGCTGTCTGTGAGAGTGACAAGTTTCATTATGTAGATATCAACCAAAAAGGAGTGTTGAACTGGACCAGACCTTCAGATGCATACTCCCGCCAAGATACTGGGAAGTCAAAGTTTCAGACTGAACCTTGTTCCAAGGATACCGCATACACTTTGAAGTTTCCTGCTGGCTATGAGTTACATGAAGCACTTGGGCCAAGTTTTCTAAGAGGGAGCAAATATTTTGATTGGGCAGTAAAGGCATATCAAGATGTTAAAGCCGCTGAGATGTCAGATGAGCTAAGCTGTAGCCAATTGACTTCTGAATCTCAGCCAGAGCATCTCTTAGAGGCTATGGTGGCTAACATCTGCCATAGTAATAATAATGTCAATAGCGAGTTGTCATTTTCTACAACAATGCAGGCTGCAATAGCCTCAGGAAGTAATCCTGAGGGTTCAATCCACACTGTCCACACCATTAATTCTGAAAGCTGTTCAATAGATCAGCCTCACATTGGTAGAGAGGAAAAACACTATAATTTGGGTTCATCTGGGATATGTGGTATAATGTCTCCAAAGGGTTTTTCTTCTACATGCCCTAGTTCATGTAGTGAACAATTTGAGAGGTCTTCTGAACCAACTAAGAACAGCAAGAAGAGGGCTAGGCCTGGTGAAAGTTGTAGGCCTAGACCAAGGGACAGACAACTTATCCAAGATCGTATTAAGGAGTTGAGGGAACTGGTACCAAATGGAGCAAAGTGCAGTATTGATTCGCTTCTGGAGTGCACCATAAAACACATGCTCTTTCTCAAGAATGTAACCAAGCATGCTGACAAGCTAAATAAATTTACGGACACAAAGACTAAGTTGCAGCACATGGAAAAAGATATTAACGGATCATCAAGTCATCAACAAGGTTCAAGTTGGGCAATGGAAGTCGGAGGCCATCTGAAAGTTCGTTCAATATTAGTGGAGAATCTTAATAAGAATGGCCAGATGCTTGTTGAGATGTTGTGTGAGGAGTGTAGCCATTTTCTTGAGATAGCAGAAGCCATCAGAAGCATGGGTCTGACAATATTGAATGGGGCAACAGAAGCTCATGGCGAGAAGACATGTATATGTTTTGTGGTTGAGGCAGGGTCAGAAGGCCAAAACAACAGAAATTTACACAGATTGGATATCTTGTGGCCGCTTGTTCAATTACTGCAATCCAAGAGCACTATGTATTCATAA 2229 0.4096 MGSNLHRLLRSFCLGTDWKYAIFWKLKHRARMILTWEDAYYDNPNICDSSGNKSCQNTWEQIDSADFSHDPLELAVAKMSYHVYSLGEGIVGQVAVTGKHRWIYEDNQVTSSGPSLEIADGWQSQFSAGIRTIVVIAVVPIGVVQLGSLNKVAEDMGVITCIRSLFLSNQDYTLHHDPNQVQNSLKNSSSLLDSKASESVPAHLHNTEKTMKHESLDNLMPFQGPGNNYSPHAVNQKMTVDVAKHEGPELYSDGNFILLQSMSNMMNVEQHKFLGMRPINERNFEWNSSGCDDTSVESGKKLSSFLHNLVTGNNGVNDLVCPSKIVGFDSVSFSSEFLDTAVCESDKFHYVDINQKGVLNWTRPSDAYSRQDTGKSKFQTEPCSKDTAYTLKFPAGYELHEALGPSFLRGSKYFDWAVKAYQDVKAAEMSDELSCSQLTSESQPEHLLEAMVANICHSNNNVNSELSFSTTMQAAIASGSNPEGSIHTVHTINSESCSIDQPHIGREEKHYNLGSSGICGIMSPKGFSSTCPSSCSEQFERSSEPTKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTIKHMLFLKNVTKHADKLNKFTDTKTKLQHMEKDINGSSSHQQGSSWAMEVGGHLKVRSILVENLNKNGQMLVEMLCEECSHFLEIAEAIRSMGLTILNGATEAHGEKTCICFVVEAGSEGQNNRNLHRLDILWPLVQLLQSKSTMYS 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01638 742 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 553 602 IPR011598 GO:0046983
Vian3g01638 742 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 740 IPR043561 GO:0003700|GO:0006355
Vian3g01638 742 MobiDBLite consensus disorder prediction 538 567 - -
Vian3g01638 742 MobiDBLite consensus disorder prediction 543 567 - -
Vian3g01638 742 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01638 Vian-Chr3 18135921 18143310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01638 1 738 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 41.032 2.86e-157 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01638 - - gmx:100777740 1196.03