Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01621 ATGGAGAAGAAGATAGAAGATCCTATTTTATATGGTTTCATTCGGAGCATGCTTGATGCTAGAGTGTTAAATCTAGAGTTTGGGGGTTTTCCTAAGGGAAATGGTCTCCCACAAGAAGGGGTTTTGTCATTGAATATTTACCTTGACCTCTTTGACATTGAATTTTGCAGGCTGTCGATGAAATATGAAGGCATATGCGATGGAGGGCTAAATGAGCGAGAGAGGAAGAGTTCTGGTGTGAAAGTTTACTCTTGTCGCTATAAGGATGAGATTTGTTTTGTAGTTTATGGTTCAAGGGATGTTGTTGTTAATTTGAGCAGATTATCTGAGTTGCTCGGCTCCTGCGCCATTGCCAACGTCCGCTACTCCACCGCTGGCCACTCCAAGCTCGTGAGCGTCCAACCCTTCGTTGCCGGCTACCGTTTCGGCTCCGTCGCCGTCGCGCACAATGGAAACTTCGTGAACTACCGCTCCAAACTGGAAGACAATGGGTCCATCTTCAACACGACCTCCGACACCGAGGTCGTGCTCCACCTGATTGCCACCTCCAAGCACAGACCTTTCCTACTCAGAGTCGTGGATGCCTGCGAGAATCTGAAGGGGGCGTACTCCCTGGTGTTCCTCACGGAGGACAAGCTGGTGGCTGTGAGGAACCTCTTCGGGTTCCGACCTTTGGTGATGGGAAGGAGAAAGAACGGCGCTATGGTTTTCGCCTCGGAGACATGCGCGCTGGATTTGATCGATGCGACGTATGAGAGAAAGGTGAACCCGGGTGAGGTTGTGGTGGTGGACCACACGGGAATCCAATCCCTCTGCCTCGTGACTCATCAGGAGACAAAGCAATGCATCTTCGAGCACATATACTTCGCACTTCCCAACTATGTTGTCTTCAGGAGGTCTGTGTACGAGTCTAGGAGGAAATTCGGGGAAATACTGGCCACTGAGAGCCCCGTTGAGTGCGACGTTGTGATTACGGTTCCCGATTCTGGGGTGGTGGCTATGCTTGGCTATGCTGCAAAAGCTAGGGTTCCCTTTCAGCAGGGGTTGATAAGGTCGCACTATGTGGGGAGGACTTAA 1077 0.507 MEKKIEDPILYGFIRSMLDARVLNLEFGGFPKGNGLPQEGVLSLNIYLDLFDIEFCRLSMKYEGICDGGLNERERKSSGVKVYSCRYKDEICFVVYGSRDVVVNLSRLSELLGSCAIANVRYSTAGHSKLVSVQPFVAGYRFGSVAVAHNGNFVNYRSKLEDNGSIFNTTSDTEVVLHLIATSKHRPFLLRVVDACENLKGAYSLVFLTEDKLVAVRNLFGFRPLVMGRRKNGAMVFASETCALDLIDATYERKVNPGEVVVVDHTGIQSLCLVTHQETKQCIFEHIYFALPNYVVFRRSVYESRRKFGEILATESPVECDVVITVPDSGVVAMLGYAAKARVPFQQGLIRSHYVGRT 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01621 358 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 100 305 IPR029055 -
Vian3g01621 358 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 56 266 IPR017932 -
Vian3g01621 358 Pfam Glutamine amidotransferase domain 133 244 IPR017932 -
Vian3g01621 358 SUPERFAMILY PRTase-like 282 358 IPR029057 -
Vian3g01621 358 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 102 358 - -
Vian3g01621 358 Gene3D - 306 357 IPR029057 -
Vian3g01621 358 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 98 297 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01621 Vian-Chr3 17833587 17842107 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01621 37 358 PRT Gene Family AT4G34740 64.832 5.05e-138 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01621 K00764 - var:108330186 471.47