Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01617 ATGCTTTTGTCTTTCTTTGGCAAGATTCACGATGGTTTCTCAGAAGTGTTAGCACCAATAAGAAGATCACTAACACAGATGATCAACGACGATCCACTGAATGCATCAGCACAAGTGCCAGATGACGTTTTGGAAGGACACTTTGTGGTTGTTGCTAAAAAGGGTGAAGAAACCAAACGGTTTGTTATGGAGTTGCACTATTTGTGTAACCCTGCATTTTTGGGACTGTTGGAGAGAGCAAGAGAAGAGTATGGTTTCAGGCAAAAGGGGGTTTTGGAAATTCCCTGCCACCCTCAAGAATTAGAGAAGATTCTAGAAGAAAGACGAGATCAAAGTGTGGGAGATGGAAGCAAATTAACAGATTCAATTCAAATGAGTTGA 381 0.4121 MLLSFFGKIHDGFSEVLAPIRRSLTQMINDDPLNASAQVPDDVLEGHFVVVAKKGEETKRFVMELHYLCNPAFLGLLERAREEYGFRQKGVLEIPCHPQELEKILEERRDQSVGDGSKLTDSIQMS 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01617 126 MobiDBLite consensus disorder prediction 106 126 - -
Vian3g01617 126 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 34 104 IPR003676 GO:0009733
Vian3g01617 126 Pfam Auxin responsive protein 35 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01617 Vian-Chr3 17817709 17818089 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01617 36 106 Calmodulin-binding Proteins AT5G20810 39.437 1.67e-10 54.3