Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01615 ATGATTAGGTCTTTCGTTGGGAAGATAGAGAAGAGTGTTTCACTCTTCGTACACAGGAGACCCCAAATTGTGGTGTCAGATGATATTAGGGAAGGGTATTTTGCTGTTCTTGCAACTAAGGTTGAAGAATCCAAAAGGTTCATCGTTGGCTTAAATTTCTTGAATGATCCTGCTTTCTTGGGACTGCTGGATCAAGCTCAGGAAGAATTTGGTTTCAGACAAAAGGGAGCTCTTGCAATCCCTTGTCAGCCTCAAGAATTACAAAAGATTCTAGATCGTTCCGGAGTGTGA 291 0.4192 MIRSFVGKIEKSVSLFVHRRPQIVVSDDIREGYFAVLATKVEESKRFIVGLNFLNDPAFLGLLDQAQEEFGFRQKGALAIPCQPQELQKILDRSGV 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01615 96 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 20 90 IPR003676 GO:0009733
Vian3g01615 96 Pfam Auxin responsive protein 26 92 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01615 Vian-Chr3 17794595 17794885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01615 28 91 Calmodulin-binding Proteins AT3G43120 42.188 3.25e-11 54.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01615 3 17794595 17794885 Vian3g01615 3 17794595 17794885 ECH