Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01605 ATGCCAAACACAGAAAAAAAAAAAAAAGGATTTGTGGTTTTTGAGTCAGAAAAGCCGACGCTTTTTGGGGTCAATTTATATCTATTTGAACTTAAGTCTAGTTCAAATCAGGTAGCAATGAAGTGTTTTCCATTCTACTTTGGAGAGAAGAAGGATGGTCCCAAGAGCTTGCAGTCCATTTCGGGTCGGTCCAACATTTCTACTACTGTTGAGGCTGAGATGAGGAGATCTGGTTCTGAATTGAACTCTATGGATGCCTCAGACGCCAGCACAGACTCCCTTAGGAGAAATGCATTTCCCAGCCTGTCTCAAAGACCCAGCAACCTCAGAGTATTTACTGTGCCCGAACTAAAAACATCCACAAAGAGTTTTAGTCGCTCTGTGATGCTTGGAGAGGGTGGGTTTGGGTGTGTCTACAAGGGGTTGATCAAGAGTGTTGATGATCCTTCCACAAGAATTGAAGTTGCTGTTAAACAGCTTGGCAGAAGAGGAATTCAGGGGCACAAGGAATGGGTCACAGAAGTGAATGTTCTGGGTATTGTGGAGCATCCAAATCTGGTGAAACTAGTGGGATACTGTGCTGATGATGATGAAAGAGGAATCCAAAGGCTTCTGGTGTATGAATATATGCCCAACAGAAGTGTGGAACACCATTTATCACCACGATCAGAAACTCCTCTCCCATGGAATAGGAGGTTGAAAATAGCCCAAGATGCTGCTCGTGGCTTAACATACCTGCATGAGGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATTCTTTTGGACGAGCAGTGGAAAGCAAAGCTGTCAGACTTTGGGCTAGCAAGATTGGGACCATCTGATGGGTTAACTCATGTCTCAACAGCGGTAGTTGGAACAATGGGTTATGCAGCTCCAGAGTATGTTCAAACTGGACGTCTTACATCAAAGAGTGATGTATGGAGCTATGGTGTCTTCCTTTATGAGCTCATTACTGGCCGGCGGCCGATTGACCGAAATCGCCCCAAAGGTGAGCAGAAAATGTTGGAATGGATAAGGCCATACCTTTCAGATGGAAGGAAATTTCAATTAATATTGGATCCAAGACTTGAGAGGAAACACCTCTTCAAGCCAGCACAAAAACTTGCTGTAATAGCAAACAAATGCTTGGTCAGAAACCCAAAGAATCGCCCAAAGATGAGTGAAGTGTTACAAATGGTGACTCAGGTTGTGGAGTCTTCAGTGAGTACAAATCCACAGCCACCCTTGAAGGGTGTTGTAGCCTCCGAAGAAGCTTTTGCTGAAACGGTGAACAAGAAAATTACCATGGATCAACAACCACATTGTAATTGGTTAAGGATGTGGAGACCAAAGTTTTTAAGTACATGGTTGTAG 1389 0.432 MPNTEKKKKGFVVFESEKPTLFGVNLYLFELKSSSNQVAMKCFPFYFGEKKDGPKSLQSISGRSNISTTVEAEMRRSGSELNSMDASDASTDSLRRNAFPSLSQRPSNLRVFTVPELKTSTKSFSRSVMLGEGGFGCVYKGLIKSVDDPSTRIEVAVKQLGRRGIQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLVYEYMPNRSVEHHLSPRSETPLPWNRRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDEQWKAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYVQTGRLTSKSDVWSYGVFLYELITGRRPIDRNRPKGEQKMLEWIRPYLSDGRKFQLILDPRLERKHLFKPAQKLAVIANKCLVRNPKNRPKMSEVLQMVTQVVESSVSTNPQPPLKGVVASEEAFAETVNKKITMDQQPHCNWLRMWRPKFLSTWL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01605 462 Gene3D Phosphorylase Kinase; domain 1 97 209 - -
Vian3g01605 462 PANTHER OS01G0588500 PROTEIN-RELATED 84 408 - -
Vian3g01605 462 ProSiteProfiles Protein kinase domain profile. 124 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g01605 462 SUPERFAMILY Protein kinase-like (PK-like) 100 405 IPR011009 -
Vian3g01605 462 FunFam Serine/threonine-protein kinase BIK1 91 209 - -
Vian3g01605 462 Pfam Protein kinase domain 126 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g01605 462 Gene3D Transferase(Phosphotransferase) domain 1 210 419 - -
Vian3g01605 462 FunFam Serine/threonine-protein kinase PCRK2 210 419 - -
Vian3g01605 462 ProSitePatterns Protein kinases ATP-binding region signature. 130 158 IPR017441 GO:0005524
Vian3g01605 462 CDD STKc_IRAK 130 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01605 Vian-Chr3 17628180 17631483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01605 40 402 Glycoside Hydrolase AT3G07070 43.733 2.90e-92 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vian3g01605 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01605 - - gmx:100305438 801.201