Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01594 ATGGCTTCGATTCAACGTCCTGCGAGTTCAGGATCGTCGGAGGGAGGAGATCCGGCCGTAGACGAGAGGAAGAGGAAGCGGATGGAGTCGAACCGCGAATCGGCGAGGAGATCGCGGATGCGGAAGCAGAAGCAGCTGGAAAACCTAACCGAAGAAGCGAGCCGATTGCAAAACGAGAACGTACATCTGGCGCAGAGCATAAAGGCGAAGGAGGAAGCGTACGTTGAGATGGAAGCTGCCAACGACATCCTCAAAGCTCGGACAATGGAGCTCGCCGATCGTTTGCGGTTTCTGAATTCAATTCTCGAGATCGCCGAAGACGTCGGCGACCTCTCCGTCGAGATCCCGCAGATTCCGGACCTTCTCTTCAATCCTTGGCAGATCCCCCACCCTATGATGGCGTCGCCGGACATGTTCCTCCATGGAACTGAAGGACTGTTTGCTTCATAA 450 0.5533 MASIQRPASSGSSEGGDPAVDERKRKRMESNRESARRSRMRKQKQLENLTEEASRLQNENVHLAQSIKAKEEAYVEMEAANDILKARTMELADRLRFLNSILEIAEDVGDLSVEIPQIPDLLFNPWQIPHPMMASPDMFLHGTEGLFAS 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01594 149 Coils Coil 25 87 - -
Vian3g01594 149 CDD bZIP_plant_GBF1 24 74 IPR045314 GO:0003700|GO:0006355
Vian3g01594 149 PANTHER BZIP TRANSCRIPTION FACTOR 44 6 108 - -
Vian3g01594 149 MobiDBLite consensus disorder prediction 1 53 - -
Vian3g01594 149 SUPERFAMILY Leucine zipper domain 23 77 IPR046347 GO:0003700|GO:0006355
Vian3g01594 149 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 26 41 IPR004827 GO:0003700|GO:0006355
Vian3g01594 149 Pfam bZIP transcription factor 23 79 IPR004827 GO:0003700|GO:0006355
Vian3g01594 149 MobiDBLite consensus disorder prediction 17 49 - -
Vian3g01594 149 FunFam BZIP transcription factor 21 72 - -
Vian3g01594 149 Gene3D - 21 77 - -
Vian3g01594 149 SMART brlzneu 19 83 IPR004827 GO:0003700|GO:0006355
Vian3g01594 149 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 68 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01594 Vian-Chr3 17486604 17487053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01594 1 139 bZIP Transcription Factor Family AT3G62420 49.315 3.83e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian3g01594 bZIP_1 7.6e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01594 K25786 - gmx:778189 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02830 2 49190727 49191161 Vian3g01594 3 17486604 17487053 PCT