Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01590 ATGGTGTCCAAACCTACAGACTCCGTTTCCAGACCTCGAAAACAACTTGGAGAGGCTGCAAATGATGCATTGGGAACCTTGTCCCTCAAGATAAATCAGTTGAAAAAGCAAATCCAGGTGGAGAGAATTGTATACATTAAAGAAAAAATTCAGAGCAATGAGAAGAAGCTACAATGTCATACCTCAGGAGTCCTATCAACAATATCAACAAGGGGTTATTCACAGACAGAGGAAAATAGGAAAATTCCAATTCTTTCTAGAATTGACCGTCCTTTATGTAAATTCAATGGTTTCTCTCCGGTCTCAGGAGACAAAGACCACAACAATCAAGATGTATTATCTGCTACAAGTATCAAAATACCATATATTGAAAGATTACCGCCATATACCTCTTGGATATTTCTGGACAGAAATCAGAGAATGGCTGAAGATCAGTCAGTTGTTGGAAGAAGACGAATCTACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAAGAGTTAACAGAACATGAGGAAGAAAAACATGAATTTTCTGAGGCTGAAGACCGTGTTCTGTGGATGGCATTTGAGGAATATGGGTTAAATGAGGAGGTACTGAATATTGTTAGCGAATTTGTTGGGGGCAAGAGTTCAGAAATTCAGGAGAGGTACAAAAGTATTAAGGAAAAGAACATTGGTAGGTTGGATCAGCCTTCGGAAAACTCAGGAGATCTTGAATCTATTATTGGCATCTCTCCAGAGAAAACCCTGAGTGCTGCATTAGATTCTTTTGATAATCTTTTTTGTCGCCGGTGCCTGCAGATTTTTGATTGTCGTCTTCATGGCTGTTCTCAACCTTTAGTATATCCTAGTGAAAAACAGACAGTATGGTCTGATCCTGAAGGTGACAAGAAACCATGCAGTGATCAGTGTTACCTTAAGCAGTTAAATGAAGTCAAAGGTGTGTCAGAAGATGCAACTTCTGGGTCTGATCAAAATAAGAGAACTACAACTATGGAAGAGGCAGATGGGATATTGGCACCCTCCACTATAGAGGAACCTGGTAATCAGAGTACATCACCTTTTCCAACAGAAGTTGATTGTCATAGATCTCTCAATTTAAATGTTCCTATCTCAGTAAGTGTGGAGAAACGGAAAGTCACAAATGTGTCAGACACAGCACTTTGTGACTCAACTCCCCTTCCCGATGGTTCTCAAAATTCTAATAAAAAACTGAAGACTATCTCAGATGATGTAATTACTGTAAATAGTGATTCTAGCAATAACCTTTTGGGTGCATGCGATGAAAGTAAACATACTATTACTTGTGCAATTTTGGACAAATCTGTTAATAATAATTCCAATAAATTAATAGACTCTTCTAGCACTTGCGATACGGATGAACATGACAAAAGTATTGGGGATGGACCCAAAGACCCTACAAATAAAACAGAATTGAAGAAGTTGTCCCCTTCAATGGAAGGGAAAGTTGATGGGATGCCAGGTCTCTCAGATTGGAAACCTCTAGAGAAAGAATTATACTTGAAGGGAGTAGAGATGTTTGGAAGAAATAGCTGCCTCATAGCAAGGAACTTACTTTCTGGCTTAAAGACTTGCATGGAAATAGCTACTTACATGCATGCTGGAGGAGTGTCAATGCCCCACGGATCTATCATTGCACCTAGTTCAATCATGGATGACAAGGGAAAATTTGATGCAGAGTACACAGACCAGGAGATGCCATCTAGGTCACGATTGCTGAGGAAAAGGGGCAAAACTAGGAAGTTTAAATATTCTTGGAAGTCTACTGGCCACCCATCAATATGGAAAAGAATTGCTGATGGGAAAAACCAATCTTGCAAGCAGTATACACCATGTGGATGTCAGTCAATGTGTGGAAAGGAATGTACTTGTGTTAATGGTGGAACATGCTGTGAAAAGTATTGCGGTTGTTCAAAAAGCTGCAAAAATCGATTCAGAGGATGCCATTGTGCCAAGAGTCAGTGCAGAAGTCGACAATGTCCGTGTTTTGCTGCAGGACGGGAATGTGACCCAGATGTTTGTCGGAATTGCTGGGTTAGTTGTGGTGATGGTTCATTAGGGGAGCCACCCCGGCGTGGAGAAGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGAATTCTCTTGGCAAAGTCTGATGTTGCAGGATGGGGAGCTTTCTTGAAGAACCCTGTTAACAAAAATGATTATCTAGGAGAGTACACAGGAGAACTGATCTCCCACCGAGAAGCCGATAAGCGTGGGAAAATATATGACCGTGCCAACTCTTCTTTCCTTTTTGACTTGAATGATCAGTACGTTCTTGATGCTTATCGCAAAGGAGACAAGTTAAAATTTGCAAACCACTCGTCAAATCCCAACTGCTATGCAAAGGTGATGCTGGTTGCTGGAGATCACCGAGTAGGCATATTTTCCAAGGAACACATAGATGCTAGCGAGGAGCTCTTCTATGATTATCGCTATGGTCCAGATCAAGCACCGCCATGGGCACGTAAACCTGAGGGTTCCAAGAGCGACGAATCAACAGTTTGTCAAGGCAGAGCAAAGAAACACCAGTCTCATTGA 2610 0.4119 MVSKPTDSVSRPRKQLGEAANDALGTLSLKINQLKKQIQVERIVYIKEKIQSNEKKLQCHTSGVLSTISTRGYSQTEENRKIPILSRIDRPLCKFNGFSPVSGDKDHNNQDVLSATSIKIPYIERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTEHEEEKHEFSEAEDRVLWMAFEEYGLNEEVLNIVSEFVGGKSSEIQERYKSIKEKNIGRLDQPSENSGDLESIIGISPEKTLSAALDSFDNLFCRRCLQIFDCRLHGCSQPLVYPSEKQTVWSDPEGDKKPCSDQCYLKQLNEVKGVSEDATSGSDQNKRTTTMEEADGILAPSTIEEPGNQSTSPFPTEVDCHRSLNLNVPISVSVEKRKVTNVSDTALCDSTPLPDGSQNSNKKLKTISDDVITVNSDSSNNLLGACDESKHTITCAILDKSVNNNSNKLIDSSSTCDTDEHDKSIGDGPKDPTNKTELKKLSPSMEGKVDGMPGLSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCMEIATYMHAGGVSMPHGSIIAPSSIMDDKGKFDAEYTDQEMPSRSRLLRKRGKTRKFKYSWKSTGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKECTCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFSKEHIDASEELFYDYRYGPDQAPPWARKPEGSKSDESTVCQGRAKKHQSH 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01590 869 SMART set_7 720 841 IPR001214 GO:0005515
Vian3g01590 869 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 21 868 IPR045318 GO:0006338|GO:0042054
Vian3g01590 869 CDD SET_EZH 720 836 - -
Vian3g01590 869 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 869 IPR025778 GO:0031519
Vian3g01590 869 SMART CXC_2 655 692 IPR033467 -
Vian3g01590 869 ProSiteProfiles SET domain profile. 720 835 IPR001214 GO:0005515
Vian3g01590 869 MobiDBLite consensus disorder prediction 841 869 - -
Vian3g01590 869 MobiDBLite consensus disorder prediction 848 862 - -
Vian3g01590 869 ProSiteProfiles CXC domain profile. 607 706 IPR026489 -
Vian3g01590 869 SUPERFAMILY SET domain 621 838 IPR046341 -
Vian3g01590 869 Coils Coil 165 185 - -
Vian3g01590 869 MobiDBLite consensus disorder prediction 458 499 - -
Vian3g01590 869 FunFam Putative histone-lysine N-methyltransferase EZH2 621 837 - -
Vian3g01590 869 Gene3D SET domain 621 837 IPR046341 -
Vian3g01590 869 MobiDBLite consensus disorder prediction 460 490 - -
Vian3g01590 869 Pfam CXC domain 659 690 IPR041355 -
Vian3g01590 869 Pfam SET domain 731 834 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01590 Vian-Chr3 17443889 17454535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01590 709 863 C2H2 Transcription Factor Family AT2G23740 24.419 7.38e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vian3g01590 SET 5.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01590 - K11430 pvu:PHAVU_007G213900g 1607.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01590 3 17443889 17454535 Vian3g01590 3 17443889 17454535 ECH