Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01556 ATGCTCTCTATTTTGCCATCCGCCTCCGCTTCTTTGAAGGTTGATTTCTACAAAACCACGTGTCCTTCTGCGGAAGCAATAGTCAGAAGCGCTGTGGATAAAGCCGTTTCTCTCAACCCAGGCATAGCTGCTGGTTTGATCAGAATGCATTTTCATGATTGTTTTGTGAGGGGCTGTGATGGTTCTGTGCTGTTGGAATCCACACCGGGGAACCCATCAGAGAGAGACCACCCTGCCAACAACCCAAGTCTACGAGGCTTCCATGTCATCGACGAAGCCAAGGCCCAAATAGAGGCAGAGTGTCCACACATCGTGTCCTGTGCAGACATTCTCGCTTTTGCTGCTCGAGACAGCGCCAACAAAGTTGGAGGCATAAACTACGCAGTGCCGGCTGGACGCAGAGATGGTCGTGTCTCCATCAGAGACGAAGCGTCACAACTGCCCCTTCCAACCCTCAACGCAGACCAACTCATCGATAACTTCCGACAAAAAGGGTTGTCTGCAGATGAAATGGTGACACTTTCTGGAGCCCATTCTATTGGTGTGTCACACTGTTCCTCCTTCTCCGACCGCTTGCACTCTTTCAATGCCACCTTTCCTCAAGATCCTTCCATGGATTCCAAATATGCTACGTCGTTGAAACCCAAGTGTCCACCGGGGAGCGATAACACGGTGCCTCTGGATGCCTCCACTCCTAACCGTTTGGACAACAAATACTACACAGAGCTGAAGAACCACCGTGGTTTGCTTACCTCGGATCAGACCTTGCTCGCCAGCCCCTCAACCAGGCCAATGGTACTCACCAATGCTAAATATTCTTCAGTCTGGGCTCGCAAGTTTGCTAAGGCAATGGTCCATATGGGTTCCATTGACGTCCTCACCGGTTCACAGGGCGAGATCAGGACCCGTTGTTCCCTCGTCAATTGA 927 0.5124 MLSILPSASASLKVDFYKTTCPSAEAIVRSAVDKAVSLNPGIAAGLIRMHFHDCFVRGCDGSVLLESTPGNPSERDHPANNPSLRGFHVIDEAKAQIEAECPHIVSCADILAFAARDSANKVGGINYAVPAGRRDGRVSIRDEASQLPLPTLNADQLIDNFRQKGLSADEMVTLSGAHSIGVSHCSSFSDRLHSFNATFPQDPSMDSKYATSLKPKCPPGSDNTVPLDASTPNRLDNKYYTELKNHRGLLTSDQTLLASPSTRPMVLTNAKYSSVWARKFAKAMVHMGSIDVLTGSQGEIRTRCSLVN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01556 308 ProSitePatterns Peroxidases active site signature. 43 54 IPR019794 GO:0004601
Vian3g01556 308 FunFam Peroxidase 148 287 - -
Vian3g01556 308 PANTHER PEROXIDASE 25-RELATED 14 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g01556 308 Gene3D Peroxidase, domain 2 148 287 - -
Vian3g01556 308 Pfam Peroxidase 28 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g01556 308 ProSitePatterns Peroxidases proximal heme-ligand signature. 170 180 IPR019793 -
Vian3g01556 308 CDD secretory_peroxidase 12 307 IPR033905 GO:0004601|GO:0042744
Vian3g01556 308 FunFam Peroxidase 15 156 - -
Vian3g01556 308 SUPERFAMILY Heme-dependent peroxidases 12 308 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian3g01556 308 ProSiteProfiles Plant heme peroxidase family profile. 11 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g01556 308 PRINTS Plant peroxidase signature 242 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g01556 308 PRINTS Plant peroxidase signature 282 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g01556 308 PRINTS Plant peroxidase signature 21 40 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g01556 308 PRINTS Plant peroxidase signature 104 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g01556 308 PRINTS Plant peroxidase signature 226 241 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g01556 308 PRINTS Plant peroxidase signature 45 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g01556 308 PRINTS Plant peroxidase signature 85 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g01556 308 PRINTS Plant peroxidase signature 169 181 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g01556 308 PRINTS Plant peroxidase signature 123 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g01556 308 PRINTS Haem peroxidase superfamily signature 123 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g01556 308 PRINTS Haem peroxidase superfamily signature 170 185 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g01556 308 PRINTS Haem peroxidase superfamily signature 43 57 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g01556 308 PRINTS Haem peroxidase superfamily signature 105 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g01556 308 PRINTS Haem peroxidase superfamily signature 228 243 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g01556 308 Gene3D - 15 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01556 Vian-Chr3 16990843 16991860 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01556 1 308 Peroxidase AT1G05260 47.937 1.24e-91 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01556 K00430 - gmx:100815158 550.051