Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01507 ATGGGAAACCTCTTCTGGCCTGGCATTGTTGCAGCACTTGTTTTTGGCTTCTGGGTTGATGCTTTTTCAGCCTTTCAATATCACTACTTCAATGAAACCGAGTTCTCTTTGTTGGAGGCTCGAGAACAACCATATTCGTCCCTCATTGGGAGGTCTCCTCTTATGGTAGGACTCACACTCATTCCAAGTGCTGCTGCTAAAGGAGCAGTTTGCTTGGATGGAACATTGCCTGGCTATCATTTACATCGGGGATATGGATCAGGAGCTAACAGCTGGATTGTTAATTTAGAGGGAGGTGGGTGGTGTAATGACGTTAAATCATGTGTTTATCGCAAGAAAACACGGCGTGGATCATCAAGATTCATGGAGAAACAGATACCATTTACAGGAATATTAAGCAATAGTGCTGAAGATAATCCAGATTTTTTCAACTGGAACAGAGTGAAAATTCGTTATTGTGATGGTGCATCGTTTGCCGGGGATAGTGAACATCAGGCTGCTCAACTACAATTTAGAGGACAACGTATATGGTTGGCTGCAGTGGAAGATTTGATGTCAAAGGGAATGAGATTTGCCAAGCAGGATTTTCGGTCCTTCAATTGTTGGTTAATTCCTCCCTTGAATTACAGGATTGACGTGTCTAGGGGACATAGCATCAGGAATCTTTTCAGTGGTGTCGTAGAGCTGCAGGGAGTGCAGAAGAATCTACCTCGCACTTGTACTAATCACCTCGATCCCACTTCGTGCTTCTTCCCTCAGAACTTGATTGCCAATATTAGAACCCCGCTATTCATTCTTAATACCGCTTATGACTCATGGCAGATACAATCAAGCTTAGCTCCTTCATCGGCTGATCCCCGTGGCTATTGGCATGATTGTAGATTAAATCATGCTAAATGTACTGCTTCACAAATCCAATATTTGCAAGGTGGATTCAGGAATCAAATGCTGAATGGTATTAAAAGCTTCTCAAGATCATATCAGAATGGATTATTCATAAATTCATGTTTTGCTCACTGCCAATCTGAGAGGCAGGATACATGGTTTGCAGACAATTCTCCTGTCATTGGGAACAAGGCAATTGCTCTGGCTGTTGGAGACTGGTATTTCGACCGAGCAGTTGTTAAGGCCATTGATTGCCCTTACCCTTGTGATAATACGTGCCACCATCTTGTCTTCAGATGA 1185 0.4304 MGNLFWPGIVAALVFGFWVDAFSAFQYHYFNETEFSLLEAREQPYSSLIGRSPLMVGLTLIPSAAAKGAVCLDGTLPGYHLHRGYGSGANSWIVNLEGGGWCNDVKSCVYRKKTRRGSSRFMEKQIPFTGILSNSAEDNPDFFNWNRVKIRYCDGASFAGDSEHQAAQLQFRGQRIWLAAVEDLMSKGMRFAKQDFRSFNCWLIPPLNYRIDVSRGHSIRNLFSGVVELQGVQKNLPRTCTNHLDPTSCFFPQNLIANIRTPLFILNTAYDSWQIQSSLAPSSADPRGYWHDCRLNHAKCTASQIQYLQGGFRNQMLNGIKSFSRSYQNGLFINSCFAHCQSERQDTWFADNSPVIGNKAIALAVGDWYFDRAVVKAIDCPYPCDNTCHHLVFR 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01507 394 PANTHER NOTUM-RELATED 211 390 IPR004963 GO:0016787
Vian3g01507 394 Pfam Pectinacetylesterase 212 373 IPR004963 GO:0016787
Vian3g01507 394 Pfam Pectinacetylesterase 53 194 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01507 Vian-Chr3 16448998 16453200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01507 55 394 Carbohydrate Esterase AT1G57590 66.667 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01507 K19882 - gmx:100793403 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02745 2 48388310 48394054 Vian3g01507 3 16448998 16453200 PCT