Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01501 ATGGCAGGTGACGGTACAGCTACATGCATAGACATCCTTCTTGCTATCATCTTGCCTCCTCTTGGAGTCTTTCTCAAATATGGCTGCAAGGTGGAGTTCTGGATTTGTTTGGTGCTAACCCTTTTTGGTTATATACCTGGAATTATCTATGCTGTCTATGCCATAACCAAGTGA 174 0.431 MAGDGTATCIDILLAIILPPLGVFLKYGCKVEFWICLVLTLFGYIPGIIYAVYAITK 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01501 57 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 6 57 IPR000612 GO:0016020
Vian3g01501 57 ProSitePatterns Uncharacterized protein family UPF0057 signature. 13 28 IPR000612 GO:0016020
Vian3g01501 57 Pfam Proteolipid membrane potential modulator 9 55 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01501 Vian-Chr3 16364846 16365152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01501 5 57 RCI2 Gene Family AT3G05890 79.245 2.20e-26 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01501 - - gmx:100306281 110.923