Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01472 ATGGCGTTAATTTCACACTTAACTGGTTTCAATTTTTTTCTCTCTATTGTCACTTTATTCTCTCTTTTCTATTTCTCTCACCGTCGACTAAAAGCAGAAAGTGATGCGCTGAAGAAGAAGAAGAAGAGCGATGCGCTCACGGTGCAGTTCCGTCAGATCCTGAAGAAGATTGTCACCGCGAAGGAGTCCATGGGCGACATCATGAAAACCTCGTCGTTCGCGCTCACCGAGGCCAAGTACGTCGCCGGCGACAATATCAAACACGTGCTCCTCGAGAATGTCCGGGAAGCCTCCCTCCGCGTCCGCTTGCGCCAGGAAAATGTCGCCGGTGTCAAGCTCCCCAAGTTCGAGTACACCTCCGACGCTGACGCCAACAAGAACGACCTCACCGGACTGGCGCGGGGCGGCCAGCAGGTGCAGCACTGTCGTGCCGCCTACATCAAGGCCATCGAGGTTCTCGTCGAGCTCGCCTCGCTTCAGACCTCGTTCCTCACTCTCGATGAGGTTATCAAGACCACGAATCGTAGGGTTAACGCTCAGGAGAATGTGGTGAAGCCGCGGTTGGAGAATACGATTAGTTACATCAAGGGGGAGTTGGATGAGCTCGAGAGGGAAGATTTCTTCGGGCTGAAGAAGATTCAGGGGTATAAGAAGAGGGAGATTGAGAAGCAGATGTTGTTGAAGAAGGTTGAGTCTAATTTAACTCTGCACAAAGCGGTTTCTTACAATTCCTCTAATTTGTTGGCTGTGGGTGACAAAGATGAGGATATTATCTTCTAA 780 0.5064 MALISHLTGFNFFLSIVTLFSLFYFSHRRLKAESDALKKKKKSDALTVQFRQILKKIVTAKESMGDIMKTSSFALTEAKYVAGDNIKHVLLENVREASLRVRLRQENVAGVKLPKFEYTSDADANKNDLTGLARGGQQVQHCRAAYIKAIEVLVELASLQTSFLTLDEVIKTTNRRVNAQENVVKPRLENTISYIKGELDELEREDFFGLKKIQGYKKREIEKQMLLKKVESNLTLHKAVSYNSSNLLAVGDKDEDIIF 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01472 259 Pfam ATP synthase subunit D 40 214 IPR002699 GO:0046961
Vian3g01472 259 Gene3D - 28 225 - -
Vian3g01472 259 Coils Coil 185 205 - -
Vian3g01472 259 FunFam V-type proton ATPase subunit D 11 204 - -
Vian3g01472 259 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 38 259 IPR002699 GO:0046961
Vian3g01472 259 NCBIfam V-type ATP synthase subunit D 40 218 IPR002699 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01472 Vian-Chr3 16079360 16080139 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01472 7 259 Primary Pumps ATPases(2) AT3G58730 66.412 4.02e-115 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01472 K02149 - gmx:100801612 374.4