Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01469 ATGCCTCTGTGCTATTCAAAAGCTGCAACAATTGTCATTAAAGATCTCAAATTTACATACCCCGGCATCGACGGCCACTCGCCACCGGGTTCCTCACCGCTTATTCAAAACTTCTCTCTCACTCTCGGTTCCGGCGACCGCTGCCTTCTCGTCGGTTCCAACGGCGCCGGGAAAACCACGATCCTGAAGATACTAGGAGGGAAGCACTTGGTGGAACCTGACATGGTTCGCGTGCTTGGAAGATCAGCTTTTCACGACACCACTTTGGTGTCTTCTGGTGATCTCTGTTATCTCGGTGGCGAGTGGAGGCGAGATGTTGCTTTTGCGGGTTTTGATGTGCCAATACAGATGGACGTTTCTGCTGAAAAAATGATATTTGGTGTGGCTGGGATTGATCCTCAAAGAAGAGCGGATCTCATCAAGGTATTGGACATTGATCTTTCCTGGAGATTGCATAAAGTATCTGACGGTCAAAGAAGAAGAGTACAGATTTGTATGGGTCTTCTCAAACCGTTCAAGGTTCTTCTTCTTGATGAGATAACTGTTGACCTTGATGTTCTAGCAAGAGCTGACCTTCTTAGATTTCTAAGAAAGGAATGTGAAGAGAGGGGTGCCACCATTATCTATGCAACACATATATTTGACGGTCTTGAGGATTGGCCTACACATATTGTGTATGTAGCCCATGGAAAGCTGCAACTAGCAATGCCTATGGACAAAGTCAAAGAAATTAGCAAATTGTCACTAATGAGAACAGTAGAAAGTTGGCTGCGGAAGGAACGAGATGAAGATAGAAGGAAAAGAAAAGAAAGAAAAGCAGCTGGGCTTCCTGAATTTGGAAAGAAAATTGAGGGAAGCCGTGTAACAGGGGATCCTGCACGTGCTGCAATTCGAGCAACTAATAATGGGTGGGCAGCAGGACGATTAAATTCCACCGTTGCTGGTGAGGAAAACTTCATCCTCAGCTCTAATCGAGTACTGAGGCAGTAG 990 0.4576 MPLCYSKAATIVIKDLKFTYPGIDGHSPPGSSPLIQNFSLTLGSGDRCLLVGSNGAGKTTILKILGGKHLVEPDMVRVLGRSAFHDTTLVSSGDLCYLGGEWRRDVAFAGFDVPIQMDVSAEKMIFGVAGIDPQRRADLIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLEDWPTHIVYVAHGKLQLAMPMDKVKEISKLSLMRTVESWLRKERDEDRRKRKERKAAGLPEFGKKIEGSRVTGDPARAAIRATNNGWAAGRLNSTVAGEENFILSSNRVLRQ 329
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01469 329 Pfam ABC transporter 36 181 IPR003439 GO:0005524
Vian3g01469 329 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 9 257 - -
Vian3g01469 329 SMART AAA_5 44 231 IPR003593 GO:0016887
Vian3g01469 329 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 254 IPR003439 GO:0005524
Vian3g01469 329 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 246 IPR027417 -
Vian3g01469 329 Gene3D - 6 282 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vian3g01469 Vian-Chr3 16066098 16068792 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01469 11 208 Calmodulin-binding Proteins AT2G36910 21.429 1.55e-06 48.1