Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01460 ATGTCACGCGACCACATTCCTCACAACTGTTCAAACCACAACCGCAAGCCTCAATTATTGGTACTCTATTTTCTTAAATATACTACAGTAAATACAATTGTTGAACATTTGATTTTTTACTATGGGAATTCCCTTTGTCTTCAGCTTGGTGGACGGGTTCAACCTGCCCCTGATTGGTGTAACTTAGTTGGTGGCAATTTGTCCTCTCTCGAGTCCCACATCGAAGCGCTCAAAGCCTACAACTCCTTGTTTCACCGCACTGATTTTAAGCTCGGCACGTGTCATCACCCACTAAACGACAAAGTTGCCCAGGAGTGTGGCTTCACTTCTCTCTCTATTCGGATTGTGGATGAACTTGTTACTCTTAGTTCTCAGCCACTGTTAAAAGCGCCTGATATCTCCAATGCTGGAAGGCATCTATCTGCACTTGACTTCCATTCTTCCCTTCACAATGCCAACAACGAGAATCCAGAAAACGGCCTTGTTTTACTTGATGCAAGGAATATGTATGAAACAAGGATTGGGAAGTTTCACGTGCCAAATGTTGAGACTTTGGATCCACAAGTTAGGCAGTACAGTGATTTATCCTCGTGGATAGATGATAATGGTGACCGGTTGAAAGGAAAAAATATTTTCATGTATTGTACTGGCGGAATTCGGTGTGAGATGGCATCAGCATATATTAAGTCTAAAGGTGCCGGTTTTGAGAATGTGTTTCAGTTATTTGGTGGCATACAACGCTATTTGGAGCAATTCCCAGATGGTGGTTTTTTCAAAGGAAAGAATTTTGTATTTGACCACCGGATATCGGTTGGAAGTTCAGATGCTAATGTTATGGGTACCTGCCTTATGTGTCAATGTTCGTTTGATGATTACACTTCTCGCTGCCGGTGTACTTATTGCAGAATGCTTGTTTTGGTGTGCCGTAGTTGCGAGAGTGAATCTACCGTGTATGTTTGTGAGCTATGTCAGAAACAGGGCAAGGCCGAGTCAGCACAGCTAATTGAAATTGGAGAATCAAAAACATCATTGTCGGGTGCCGAGTTCAACAACTTTTGTTCAGATTTGCCTCGAGTGCCCAGGGGAGATGATCCAAGGACCTCAAGAAAACTGAGAATCTTGTGCTTACATGGGTTTCGGCAGAATGCATCCAGTTTCAAAGGCAGAACAGCATCACTAGCCAAGAAACTAAAGAAAATCACTGAATTTGTTTTTGTTGATGCTCCCCATGAATTGCCATTCATTTACCAAACCCCCATGTTTGAGTCAAATGAAAATTGTGCATCATCATCATTGCCATCTAGTCCTCCACCACCATTGGCGAATTGCAAGAAGAAGTTTGCATGGTTTGTGGCACCCAACTTTGATGGAAGCAGTGGCGTTGACTGGAAGGTAGCAAATGGCCCATTTGATCCACTTCAATACCAGCAGCAAACTGCTGGATATGATGTTTCACTATCACACTTGAAGAATATCTTTTCCCGGGAAGGACCATTTGATGGAATCTTGGGATTTTCACAGGGAGCAGCAATGGCTGCCTTAATCTCAGCACTACAAGAAGAGCTGAAAGGTGAAATGGACTTCAAATTTGTAGTCTTGTGCTCTGGCTTTGCTCTCCGGATGAAAGCCATGGAGTGTGGCCCTATCAAGTGCCCTTCTCTTCATATTTTTGGTAATGAACATGGTAAAGACAGACAGATAGCTAACCAAACAAGCAAGGAACTTGCTTCTCTATATGACGGTGATTGTTCTGCGATAGTTGAGCATGATAATGGTCATATAATTCCTACTCGGTCCCCTTGTATTGATGAGATCAAGGATTTTCTTAATGGCTTTCTGTAG 1842 0.4278 MSRDHIPHNCSNHNRKPQLLVLYFLKYTTVNTIVEHLIFYYGNSLCLQLGGRVQPAPDWCNLVGGNLSSLESHIEALKAYNSLFHRTDFKLGTCHHPLNDKVAQECGFTSLSIRIVDELVTLSSQPLLKAPDISNAGRHLSALDFHSSLHNANNENPENGLVLLDARNMYETRIGKFHVPNVETLDPQVRQYSDLSSWIDDNGDRLKGKNIFMYCTGGIRCEMASAYIKSKGAGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGSSDANVMGTCLMCQCSFDDYTSRCRCTYCRMLVLVCRSCESESTVYVCELCQKQGKAESAQLIEIGESKTSLSGAEFNNFCSDLPRVPRGDDPRTSRKLRILCLHGFRQNASSFKGRTASLAKKLKKITEFVFVDAPHELPFIYQTPMFESNENCASSSLPSSPPPPLANCKKKFAWFVAPNFDGSSGVDWKVANGPFDPLQYQQQTAGYDVSLSHLKNIFSREGPFDGILGFSQGAAMAALISALQEELKGEMDFKFVVLCSGFALRMKAMECGPIKCPSLHIFGNEHGKDRQIANQTSKELASLYDGDCSAIVEHDNGHIIPTRSPCIDEIKDFLNGFL 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01460 613 Gene3D alpha/beta hydrolase 367 613 IPR029058 -
Vian3g01460 613 Gene3D - 129 287 IPR036873 -
Vian3g01460 613 FunFam Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 127 285 - -
Vian3g01460 613 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 134 271 IPR036873 -
Vian3g01460 613 FunFam esterase OVCA2 isoform X6 367 613 - -
Vian3g01460 613 Pfam Serine hydrolase (FSH1) 369 604 IPR005645 -
Vian3g01460 613 ProSiteProfiles Rhodanese domain profile. 157 257 IPR001763 -
Vian3g01460 613 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 12 612 IPR020936 -
Vian3g01460 613 SMART rhod_4 147 254 IPR001763 -
Vian3g01460 613 Pfam Rhodanase C-terminal 259 324 IPR022111 -
Vian3g01460 613 SUPERFAMILY alpha/beta-Hydrolases 367 613 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01460 Vian-Chr3 15992034 16003705 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01460 9 613 Sulfurtransferasese or Rhodanese AT1G09280 59.675 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01460 - - gmx:100786152 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01460 3 15992034 16003705 Vian3g01460 3 15992034 16003705 ECH