Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01441 ATGGAGGTTCACAGAAGACGTTTCAAGGGAAGCTTTCTTAGCTTCTTTGACTGGAATGCTAAATATCAAAAGAAGCACCTTTCTCACGATCCTAAGTTGCCTGAAATTTCAAAGCAAGGAAAGGAAAACGTGGACAATTTGCCAAAGTCAGAGGTCAATAAGATGAAAATGAATGACAATGGAGCAAATCCTGGTAATAATGCAAGTTCTGATTTTGATTGTGCCATATCAATTAGTAGTGATGAAGGGTGTCAGACTAAAGCCCCCGGGTTACTAGCCAGACTCATGGGTTTGGATTCACTGCCAGTTTCAAATGTCTCTGAGCTCTCTTCATTATCCACTTCCTTATATGGCTCCAACTCTCTTGAATCTTCTCGTACTCCTGATGAGGATGTTCTTCACTCAACGGTTGACCATTGTTGTAATGTTGATTCGATAAACATGGGACTTAAGTCGGTGAAGTCTTCTTGGAGTGTCATGGAATCAAAAGAGAGAAATCCAGCCATGAAAAGATTTCAGACTGAAATGCTGCCTCCAAGGTCTGCCAAAACCATTCCAGTTACTCACGACAAACTTTTGTCTCAACCTAAGCATGCAGCTCAAATTATGGAGGCAGCTGCCAAAATAATTGAGGTAAGTCCCCAGCCATGTAAGAGGAACAGAATGTCTTCAACTGGACCTTCATCTGTACCCTTAAGAATTCTTGAGCTCAAAGAGAAATTGGAAGCTTCCCAACATGAATCCAAGTTCACAGGTAAGCACACTGCTAACCCTCTGAATGGCAAGCCTAGTGAGAGGAGAAATAGTTTATGTAAATCTACTCCAAGTTCAACAGGTTCAAGAGATTCAGAAAAAAACAGTTCTTGCCGGTTGCCAAGCAAAAGAAAATCTGCTTCACTTGCAATTCCATCTAGAACCAATGTTCAGAACTGTGATGAATTGACTTTGAATGGTAATAGGGGATGTGTGAAGCAGAAGGAACATAATGATATCAAATCAAACCAGTTGTCTCGGAGCCAGAAGAAACGAAGTACAGACCGAGCCAGAGTCATTCAGCAGAAAGCTTGTAATGGCCAGAATAGTAATGTGCTTGGGAAGAATAACCAAAAACTGTGTAGTAAAACCACCAAAAGTAACCCGACTTCCAAGGCATACTCGCATAAACCAACACAAAATTGGTCTTCAGAAAGTTCTACTAGAGCAAAGAAGACCACAAAAAGGGGTGTTGTAAAAGCCAACACTGAGCCCAAAGGGTCAGACACAAGGGTAATAGGTGCTACCAAACCAGTTTCCAAAAGAAAGAGCATTTCCCAAAAGAAAAACTATATGAATAGGGATGTTCACAATGAGGCAAGAGGCACTGATACTGCGGCTAATAATTATGAAAACAAGTCTATAAAATGCAATATTACAACTGAGGGAAGTATTAACCAGGATGCATTTAGTATGAAAGGAAGCAATGGTGTGATTTCATTTATATTTACATCTCCTTTGAGAAGAAAAAGGCCTGAGTTACAGTCCTCCATTGAGAAAATGGTGGAAGCAAGGAACAAAACTGATGTCAATTCTTGTAGCAATAATGATATGCTCAATCCCAGAAAATCATCATTATCTCCTCCCAGGTTACATGTTATAGATGGTGAGGCTTTAAGTGTCCTTTTGGAGAGAAAGCTGCAAGAATTGACATCTAGAATTAACCCAACTCAATGCTCTGTGATGAAAGAATGGTCTTCTGCTGGTTTGGAAGACAGAAGTTTTCACCCCAACCTGACATCAGAATCAATAGAAGGGCCTAGCTGCAGCAGCAACAGCGAAAGCAGAAATGAAAGTTACTTAGATAGTGCATATGGCAGCACAGTTTATTCTTCCATGCAAGATGAAGAGGTATCTGATTTTTCTCCAATGAATGAATCTCTGCCTCTTGAAAACGAGGCCGAATGGTCTGAGCAAAGCTCTTGCATAGTGATGGGAGATGACATGGTTGCCATTGAACAATCAAGTATAATGTCAAATTCAGTCGAGTTTACAAGAATATCTAGGAACGTGGAATTTGAATACGTAAAGGATATACTCAACAGTGCAGAGCTGGTGACAGAAAAATTTCTGATGGGTGAGACAGATAAGATCATAATGCCAAATCTCTTTGATCTGTTGGAGACTAAGAGCACTGTGGCAGAAAGCTATGAAGAGTACTCTAAGATCGAGAGAAAGGTTATATTTGACACAGTGAGTGAATGCTTAGAGTTAAGATGTAGAAAAGTTTTTGTTGGAAGCTGCAAAGCAATGCCTAAATGGATGGCTTCAGTTCAGAAGAAGAGCTCTTTAGCTGAAGATTTGTACGAGGAAATGTTGAACCTTAGGAGCATGGAAGAATCAGTGGTGGAGGAACTAGTCTACAAGGACATGAGTACTCCATGGGGTAGATGGCTTGAGTTTGACACTGAAGCATTTGAAGAGGGTTTAGAACTTGAATTTGATGTTTTCACATGTTTGATTAACGAATTGGTTTCTGATTTGTTGCAGTTTTAA 2529 0.4013 MEVHRRRFKGSFLSFFDWNAKYQKKHLSHDPKLPEISKQGKENVDNLPKSEVNKMKMNDNGANPGNNASSDFDCAISISSDEGCQTKAPGLLARLMGLDSLPVSNVSELSSLSTSLYGSNSLESSRTPDEDVLHSTVDHCCNVDSINMGLKSVKSSWSVMESKERNPAMKRFQTEMLPPRSAKTIPVTHDKLLSQPKHAAQIMEAAAKIIEVSPQPCKRNRMSSTGPSSVPLRILELKEKLEASQHESKFTGKHTANPLNGKPSERRNSLCKSTPSSTGSRDSEKNSSCRLPSKRKSASLAIPSRTNVQNCDELTLNGNRGCVKQKEHNDIKSNQLSRSQKKRSTDRARVIQQKACNGQNSNVLGKNNQKLCSKTTKSNPTSKAYSHKPTQNWSSESSTRAKKTTKRGVVKANTEPKGSDTRVIGATKPVSKRKSISQKKNYMNRDVHNEARGTDTAANNYENKSIKCNITTEGSINQDAFSMKGSNGVISFIFTSPLRRKRPELQSSIEKMVEARNKTDVNSCSNNDMLNPRKSSLSPPRLHVIDGEALSVLLERKLQELTSRINPTQCSVMKEWSSAGLEDRSFHPNLTSESIEGPSCSSNSESRNESYLDSAYGSTVYSSMQDEEVSDFSPMNESLPLENEAEWSEQSSCIVMGDDMVAIEQSSIMSNSVEFTRISRNVEFEYVKDILNSAELVTEKFLMGETDKIIMPNLFDLLETKSTVAESYEEYSKIERKVIFDTVSECLELRCRKVFVGSCKAMPKWMASVQKKSSLAEDLYEEMLNLRSMEESVVEELVYKDMSTPWGRWLEFDTEAFEEGLELEFDVFTCLINELVSDLLQF 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01441 842 MobiDBLite consensus disorder prediction 350 399 - -
Vian3g01441 842 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 838 - -
Vian3g01441 842 MobiDBLite consensus disorder prediction 243 302 - -
Vian3g01441 842 MobiDBLite consensus disorder prediction 587 609 - -
Vian3g01441 842 MobiDBLite consensus disorder prediction 250 286 - -
Vian3g01441 842 Pfam DUF761-associated sequence motif 80 107 IPR032795 -
Vian3g01441 842 MobiDBLite consensus disorder prediction 325 423 - -
Vian3g01441 842 Pfam Domain of unknown function (DUF4378) 683 834 IPR025486 -
Vian3g01441 842 MobiDBLite consensus disorder prediction 325 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01441 Vian-Chr3 15770499 15774105 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01441 3 840 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 30.518 1.25e-77 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01441 - - vra:106771019 1517.29