Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01429 ATGAATAGGACTGAATTATCTAATATGAAGCAGCCACCTGTCCCACTGGCAACCTTGATTGGCCGGGAGCTACGAAATGGAAAAATTGAAAAGCCTTTTGTGAAGTATGGGCAAGCTGGCTTGGCAAAGAAAGGAGAAGATTACTTTCTAATCAAGACGGATTGCCAGAGAGTTCCTGGGGATTCATCAACACTTTTTTCTGTCTTTGCGATCTTTGATGGGCATAATGGTATGTCTGCTGCTATCTTTGCGAAGGAAAACATACTAAGTAATGTTTTGACTGCAATACCGCAAGATATCAGTAGGGATGAGTGGCTTCAAGCTCTGCCTCGTGCTCTAGTTGTTGCTTTTGTGAAAACTGACATAGAGTTTCAGAAGAAAGGGGAAACATCTGGAACAACAGCTACATTTGTTCTGATTGATGGATGGACTGTTACTGTTGCATCTGTCGGGGATTCCCGTTGCATATTAGATACACAGGGAGGTGTCGTCTCTCTCTTGACAGTTGATCACAGATTGGAAGAAAATGTAGAAGAGAGGGAACGCATTACTGCCAGTGGTGGTGAAGTAGGAAGACTGAACGTTTTTGGAGGCAATGAGGTAGGACCTCTTCGTTGCTGGCCTGGTGGATTGTGCCTTTCTAGATCAATTGGTGACACAGATGTCGGAGAATTTATTGTGCCAATACCACACGTTAAGCAAGTGAAGCTTTCAAAAGCTGGTGGAAGACTTATTATAGCTTCTGATGGCATTTGGGATGCTTTATCATCTGAAATGGCTGCCAAGTCATGCCGGGGTCTACCTGCTGAGCTGGCTGCAAAGATGGTGGTCAAGGAAGCTCTAAGGACAAGGGGACTGAAGGATGATACAACTTGCCTTGTTGTAGATATTATTCCGTCAGATCATCCTGTATTACCAACAATTCCTACAAAGAAACACAATATGCTAACTTCCCTTTTATTTGGAAAGAAATCTCAAAACTCTACAAACAAAAGTACCAATAAGCTTTCTGCTGTAGGTGTTGTGGAGGAATTATTTGAAGAGGGTTCTGCTATGCTTACAGAAAGATTGGGTAAGGATTTTCCATCTAGTACGAATTCTGGAATGTTCCGCTGTGCGGTTTGCCAAGCTGATCAACCCTCTGGAGATGGTTTATCAATGAACACTGGGTCCTTTTTTTCTCCAGTATCTAAGCCATGGGAAGGTCCGTTCCTCTGCACAAACTGTCAGAAGAAGAAAGATGCCATGGAAGGAAAAAGGTCTAGCAGGCCCTCAGAAACAGCATAG 1287 0.4336 MNRTELSNMKQPPVPLATLIGRELRNGKIEKPFVKYGQAGLAKKGEDYFLIKTDCQRVPGDSSTLFSVFAIFDGHNGMSAAIFAKENILSNVLTAIPQDISRDEWLQALPRALVVAFVKTDIEFQKKGETSGTTATFVLIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERERITASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSKAGGRLIIASDGIWDALSSEMAAKSCRGLPAELAAKMVVKEALRTRGLKDDTTCLVVDIIPSDHPVLPTIPTKKHNMLTSLLFGKKSQNSTNKSTNKLSAVGVVEELFEEGSAMLTERLGKDFPSSTNSGMFRCAVCQADQPSGDGLSMNTGSFFSPVSKPWEGPFLCTNCQKKKDAMEGKRSSRPSETA 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01429 428 Pfam Protein phosphatase 2C 63 285 IPR001932 -
Vian3g01429 428 Gene3D - 34 301 IPR036457 -
Vian3g01429 428 PANTHER PROTEIN PHOSPHATASE 46 296 IPR015655 GO:0004722|GO:0006470
Vian3g01429 428 SUPERFAMILY PP2C-like 38 297 IPR036457 -
Vian3g01429 428 FunFam probable protein phosphatase 2C 5 35 302 - -
Vian3g01429 428 CDD PP2Cc 43 297 IPR001932 -
Vian3g01429 428 ProSiteProfiles PPM-type phosphatase domain profile. 25 297 IPR001932 -
Vian3g01429 428 SMART PP2C_4 23 295 IPR001932 -
Vian3g01429 428 SMART PP2C_SIG_2 50 297 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01429 Vian-Chr3 15667335 15669459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01429 1 427 PP2C-type Phosphatase Gene Family AT1G09160 76.581 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01429 - - gmx:100794630 802.357