Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01416 ATGAAGACCTGGACCACATTGTACACCCTTGTTTTCCTCTTCATTCTCTTCGTTTCTTCCTCTCATGTTGCTTTCTCCTTCTCAGATAGCAAATGCAACACTACTCCCTACCCTGCATTCTGCAAAACCACTCTACCACCTCAATATTTATCCACACATGACCAATGCCGTTTCCTCCTTCACCAATCCTTATCAACAACAAAAACGCTTGCTGCATTGCTCTCTTCTTATCTCTCAAACAACTACGCAATTCCTAGTTCAACATTACACGCCCTTCAAGATTGCTTCAACCTTTCACAACTCAATATTGATTTCTTCTCCAATGTCCTCCAAGCCATTCATAGCACCGTCACTGGCTATCAAGTCTACGATTTGCATACCTTGCTCAGTGCCACTTTAACCAATCAACAAACGTGCTTGAATGGTTTTAACGAGGTGACTCCCTTTCCTGTAGTTACTAATGCCTTGTCAAGTCCACTTTCCGATGCGATCAAACTATATAGCATATCTCTGGCCCTTTTCACCCGTGGTTGGGTTAGCGATGCCATGGAAGGATCAGCCACAGTTGAGACGATTACTAATAGAAAGTTACTCCAAACAAGCGTTGACAATGTGGAGGAAAAGGAAATGGCGAAATGGCGTGAACAAAGATCTGCAAATGAGATGAAGGATTCAAAACAGGGCTGA 687 0.4309 MKTWTTLYTLVFLFILFVSSSHVAFSFSDSKCNTTPYPAFCKTTLPPQYLSTHDQCRFLLHQSLSTTKTLAALLSSYLSNNYAIPSSTLHALQDCFNLSQLNIDFFSNVLQAIHSTVTGYQVYDLHTLLSATLTNQQTCLNGFNEVTPFPVVTNALSSPLSDAIKLYSISLALFTRGWVSDAMEGSATVETITNRKLLQTSVDNVEEKEMAKWREQRSANEMKDSKQG 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01416 228 SMART PMEI_2 23 173 IPR006501 GO:0004857
Vian3g01416 228 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 176 IPR035513 -
Vian3g01416 228 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 176 IPR035513 -
Vian3g01416 228 PANTHER PECTINESTERASE 18 182 - -
Vian3g01416 228 NCBIfam pectinesterase inhibitor domain 10 175 IPR006501 GO:0004857
Vian3g01416 228 Pfam Plant invertase/pectin methylesterase inhibitor 29 173 IPR006501 GO:0004857
Vian3g01416 228 CDD PMEI-like_3 32 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01416 Vian-Chr3 15546818 15549334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01416 10 179 Carbohydrate Esterase AT4G02330 37.158 1.04e-24 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01416 K01051 - gmx:100810329 266.159