Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01390 ATGGCTGATTTTATGACCTCTACTCATCGAGTGAAGTGGATTTTTACCCCTCAACAGCTGGTTGAGAAATATAAAGCAGCTAATCAGAGAGCCAAACACATTCTAGAGAAGTATGGTGCAACTCTAATGGAAGTAGATGTTGATGGATCATTGTCATATCCTGAACCCCAGATGACTGCAAAAGACAGTGGTGAGAAGCATTCTCGGACAAAACCTCTTAGTATTGAAGAAGAACAATGCATACGGGTATTTTATGAAAACAAGCTACAAGAAGTATGTAACAACTTCCGCTTCCCTCATAAGATCCAGGCAACAGCCCTTATCTATTTTAAAAGATTCTATCTACAATGGTCGGTGATGGAACATCAACCAAAACATATTATGTTGACCTGCATATATGCTGCTTGTAAGATAGAAGAAAATCATGTGTCGGCTGAGGAGCTTGGTAAGGGGATCTCACAGGATCATCAAATGATTCTCATTAATGAGATGATAGTTTATCAGAGTTTGGAATTTGATCTAATTGTGTATGCGCCATATCGCTCGGTTGAAGGTTTTATAATTGATATGGAGGAATTTTGCAATGGTGGTGATGATCAGCTTCAAATGCTTAAGACTTTGCAAGATACAGCAAGGTTGGAAGTTGATAAAATGATGCTTACAGATGCAACACTTTTATTTCCTCCTGGGCAGTTGGCCTTGGCTGCTCTGGGTAACTCAAATGCACTGCACAATGTCATTGACTTTGATAGTTATCTTGAGAGCATTTTTCAAGGTCAGAATTCCATGCACACAATGGCCGAGCTTGCTGAATCACTGCATGCAATTGATTCCTGTGTTAAAAAGTACAAAATTCCTTCTGAGAAGGAATTGAAGCATATCAACCGAAAACTGAAGTCTTGTTGGGGTCATAGCTCTCATGACGAGGGCAAGAAGCGGGAGAAGAAATCAAAGCACAAGTCCAAAAGGAGCTCAAATGAGGCACAAAATATGGCATCTCTTGCCTAG 1008 0.4008 MADFMTSTHRVKWIFTPQQLVEKYKAANQRAKHILEKYGATLMEVDVDGSLSYPEPQMTAKDSGEKHSRTKPLSIEEEQCIRVFYENKLQEVCNNFRFPHKIQATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDHQMILINEMIVYQSLEFDLIVYAPYRSVEGFIIDMEEFCNGGDDQLQMLKTLQDTARLEVDKMMLTDATLLFPPGQLALAALGNSNALHNVIDFDSYLESIFQGQNSMHTMAELAESLHAIDSCVKKYKIPSEKELKHINRKLKSCWGHSSHDEGKKREKKSKHKSKRSSNEAQNMASLA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01390 335 SUPERFAMILY Cyclin-like 66 176 IPR036915 -
Vian3g01390 335 SMART cyclin_7 87 168 IPR013763 -
Vian3g01390 335 Pfam Cyclin, N-terminal domain 82 174 IPR006671 -
Vian3g01390 335 CDD CYCLIN_AcCycH_rpt1 3 174 - -
Vian3g01390 335 Gene3D - 63 175 - -
Vian3g01390 335 MobiDBLite consensus disorder prediction 301 335 - -
Vian3g01390 335 SUPERFAMILY Cyclin-like 179 305 IPR036915 -
Vian3g01390 335 PANTHER CYCLIN 65 325 IPR043198 GO:0006357|GO:0016538
Vian3g01390 335 Pfam Cyclin C-terminal domain 179 280 IPR031658 -
Vian3g01390 335 Gene3D - 177 282 - -
Vian3g01390 335 FunFam Cyclin h 177 282 - -
Vian3g01390 335 FunFam cyclin-H1-1 63 175 - -
Vian3g01390 335 CDD CYCLIN_AcCycH_rpt2 177 304 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01390 1 280 Core Cell Cycle Gene Families AT5G27620 63.929 2.13e-129 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01390 K06634 - gmx:100800023 587.8