Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01384 ATGGATTGTGCCGTTGTGATTTCAAACTTTGAAATCTCAGCAAGAAAAGAACGGTACTCTATTCCTCTCTTGCGCTCTATTGCTTTCTTACGCTCTATTGCTCTCTTGCGCTCTATTGCTTTCTTACGCTCTATTGCTCTCTTGCGCTCTATTGCTGAGGAAGTTGGATCTTGGAATCGTGTGCCACTCTTATCTCAGAGAACCATGAGCGATCAATCCATTCAAATCCAAATGCTCGCTGAAAAATTCCACCGTTTCGTTCTTGACTACGAACTCAAGCAACCGTCGATAACTTCTGAGCCAGATGATGTATCGAAGCAAGTGAACGAGAACTCAGACTCCGTGGATGAAAACAGTATGTCACAGGGAATCCACGAAGTTTCTCCGGATAAAGGTCATACACTTCCCATATTGAAGAAAATACTTGATCTCGATACTAAAATTCAGGATTTGAAGAAGCATCATATATCATTGTCTGATGAAGTGAAGCTCACGATTGAATCTTTTCCCGGCACTGATGTTTTGAAGTCCGTGCAGCTTCTCGGTGCTGAATATGAACTCTTGAAAAGAAAGTACCTGGAGGAGTCCTCTGAGCGAAGACGGCTTTACAATGAAGTAATTGAACTCAAGGGGAATATCAGAGTTTTCTGCAGATGCAGACCATTAAATGCGAGTGAAATTGCTAATGGGTCTGCTTCTGTTGTCAATTTTGAGTCGTCTTCAGATAATGAGCTTCAAGTCATTTGTGCAGAATCTTCTAAAAAGCAATTTAAATTCGACCATGTATTTGGGCCAGAAGATAACCAAGAGGCTGTTTTTCAACAGACCAAACCCATTGTTACATCAGTATTGGATGGGTACAATGTCTGCATTTTTGCCTATGGGCAAACTGGAACTGGGAAAACATTCACTATGGAAGGAACACCCGAACACAGGGGAGTTAACTACCGAACCCTGGAAGAGTTATTTCGGATAACTGATGAGAGAAATGGCACAATGAAGTATGAATTATCTGTCAGCATGCTGGAGGTTTACAATGAGAAGATAAGAGATCTGTTGGTGGAAAATTCAACTCAACCTACAAAGAAATTGGAGATAAAGCAAGCTGCCGAAGGAACCCAAGATGTCCCTGGACTTATTGAAGCTCGTGTTTATGGAACAGAAGACGTGTGGGAAATGCTTAAGACTGGAAATCGAGTCAGATCAGTTGGATCCACCTGCGCTAATGAGCTTAGTAGCCGTTCGCACTGCTTGTTGCGAGTAACTGTAATGGGGGAAAATTTAATTAATGGCCAGAGAACAAAGAGTCACCTTTGGCTAGTAGACTTAGCTGGCAGTGAGCGAGTGGGAAAAACTGAAGCTGAGGGAGAAAGACTGAAGGAATCTCAATTCATAAATAAGTCTCTTTCAGCGCTTGGTGATGTTATTTCTGCCCTTGCTTCTAAATCAGCCCACATTCCATACAGGCAAGTAAGTCCAAGCGCAGCAGACTTGGGAGAGACACTTTGCTCACTGAATTTCGCAACCCGCGTCCGTGGAATCGAGGGTGGCCCAGCTCGCAAGCAAGTAGACCACACTGAGCTGTTTAAGTACAAGCAAATGGTAGAAAAGCTCAAACAAGACGAGAAGGAAACAAATAAACTACAGGATAGCTTGCAAATTGCTCAACTCAGGCTTGCTACAAGAGAACAGCATTGTAGAACCCTTCAAGAAAAGGTTCGGGACCTGGAGAACCAGATCAACGAAGAAAGAAAGCACAGACTAAAGCAAGAAAGTAGAGCACTTGCTGCTGTTTCGGCTCAACCTTCATTATCGTCACAACAGACAACAGCTCAGAACAGGAAGCCACCACTGAATCCTTCCAAACTCAGACAACCACTGAGAAAAATAACCAATTCCATGCCTCCACGGTCTCCTCGGAGATCAAAGAATTACACCACATTCATGAATGGAAAGGAAAACTCTGTGAGAAGGGCTTCAATGGCGACCAATTCCGTGAGGCAAGCTGCGCCATCAACAACAGGGCAGTTCTTTCAGGCAAGGAGGAGGGTATCCATTGCCGTGAGACCACCACCTTCAACATCAACAACGCAGGTTATTCAGCCAAGGAGGAGGGTCTCCATTGCCACACTACCTCCTCACACAACTTCTGGCATGTCAACTCCACTTCGTACCTCAGCATTCCGAGTTACCGGTGGAAGCAATCAGCAATCACGGATAAGAAGCCAAAGGAAAGATAGGTATTCAAGTTTGTTTGCCCCAATGCCAGAGTTGAGAGAATCAGTCTTGACAACACCAATGTCAGTAAGGAGCAGCAGCAAGTTTATGATGAACAGTCCAACACAGGCAGATTCCAGGATGATGGGGCCCACTAGGAATCAGCCTGTTCTTGCTCTACAACGTAAACCTGTGGTCTGGAGTCCTCTTAAGCTAAGAACCATGAACAGAAAGTCATCACTCCTGCCGTATCGCTCAACCCAAATGCAGTAA 2490 0.4442 MDCAVVISNFEISARKERYSIPLLRSIAFLRSIALLRSIAFLRSIALLRSIAEEVGSWNRVPLLSQRTMSDQSIQIQMLAEKFHRFVLDYELKQPSITSEPDDVSKQVNENSDSVDENSMSQGIHEVSPDKGHTLPILKKILDLDTKIQDLKKHHISLSDEVKLTIESFPGTDVLKSVQLLGAEYELLKRKYLEESSERRRLYNEVIELKGNIRVFCRCRPLNASEIANGSASVVNFESSSDNELQVICAESSKKQFKFDHVFGPEDNQEAVFQQTKPIVTSVLDGYNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRITDERNGTMKYELSVSMLEVYNEKIRDLLVENSTQPTKKLEIKQAAEGTQDVPGLIEARVYGTEDVWEMLKTGNRVRSVGSTCANELSSRSHCLLRVTVMGENLINGQRTKSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSAHIPYRQVSPSAADLGETLCSLNFATRVRGIEGGPARKQVDHTELFKYKQMVEKLKQDEKETNKLQDSLQIAQLRLATREQHCRTLQEKVRDLENQINEERKHRLKQESRALAAVSAQPSLSSQQTTAQNRKPPLNPSKLRQPLRKITNSMPPRSPRRSKNYTTFMNGKENSVRRASMATNSVRQAAPSTTGQFFQARRRVSIAVRPPPSTSTTQVIQPRRRVSIATLPPHTTSGMSTPLRTSAFRVTGGSNQQSRIRSQRKDRYSSLFAPMPELRESVLTTPMSVRSSSKFMMNSPTQADSRMMGPTRNQPVLALQRKPVVWSPLKLRTMNRKSSLLPYRSTQMQ 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01384 829 ProSitePatterns Kinesin motor domain signature. 436 447 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vian3g01384 829 MobiDBLite consensus disorder prediction 711 746 - -
Vian3g01384 829 MobiDBLite consensus disorder prediction 769 788 - -
Vian3g01384 829 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 212 550 IPR027417 -
Vian3g01384 829 PRINTS Kinesin heavy chain signature 286 307 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian3g01384 829 PRINTS Kinesin heavy chain signature 437 455 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian3g01384 829 PRINTS Kinesin heavy chain signature 406 423 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian3g01384 829 Pfam Kinesin motor domain 218 490 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian3g01384 829 MobiDBLite consensus disorder prediction 596 655 - -
Vian3g01384 829 PANTHER KINESIN-LIKE PROTEIN KLP-3 136 642 IPR027640 GO:0003777|GO:0007018
Vian3g01384 829 MobiDBLite consensus disorder prediction 98 126 - -
Vian3g01384 829 ProSiteProfiles Kinesin motor domain profile. 212 490 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian3g01384 829 MobiDBLite consensus disorder prediction 585 655 - -
Vian3g01384 829 MobiDBLite consensus disorder prediction 111 125 - -
Vian3g01384 829 Gene3D Kinesin motor domain 207 557 IPR036961 -
Vian3g01384 829 MobiDBLite consensus disorder prediction 711 739 - -
Vian3g01384 829 Coils Coil 531 593 - -
Vian3g01384 829 SMART kinesin_4 210 522 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01384 Vian-Chr3 15201616 15206062 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01384 178 558 Calmodulin-binding Proteins AT5G65930 36.725 1.33e-65 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01384 K10406 - gmx:100788477 1257.66