Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01364 ATGGAAGTTAATACTACAGCCACCGTACCTGCAGGGCCACCAGCTAAGAACCATTCTTTCACACAGCACCGCTTACATTCAGAAAGACATAGACATAGCCACGGCCATTTCCCCACCAAAACCATTCTCATTACCGTCTCATTCGTTACCTTAGTTACGGTCCTATTTGTCATTTTTGTGGTCCTATTCTTGATCCGTCGCCAAAAATCTTCCTCCAAAAGTGGCACTTGCAAAGAAGACAGAACAGAGCTTCATGACACAAGCAGCAGGCTCATTACTTCATCAACGTTGAATTCTAGCCCAGAAGTAAAGAGTGGGTGTCTTCACGGGGGAAATTTGGGCAGGACCCCAGCACCTACATTTCGAGGAGTCCAAGTGTTCACATATAGGGAACTAGAAATTGCTACAGATGGATTCAGTGAAAGAAATGTGATTGGTGGTAATGGAGGACATGGCTTGATGTATAGAGGAGTTCTAAGTGATGGCACTTTGGCAGCAATTAAGTTGCTTCGCAGTGAGGGTAAGCAAGGGGAACGTGCCTTCAGAATAGAGAGTGAGTATTACAAGTGCCCCATTTCATCTGTCATTTGGAAGCGCCCTGCCTTATCTTCATTCTCCAACCAATCCCAGTACGCCACGGGTAAGCTTACCACAAAGTCAGATGTTTACAGCTATGGTGTGGTTCTTCTCGAACTCCTCACGGGACGTGTGCCTGTTGATATCAAGCGGGCCCAGGGAGAACACGTCCTTGTCTCTTGGGCTCTTCCACGGTTGACAAACAGAGAAAAGGTGATTGAAATGGTTGATCCAGCTCTACGCGGACAGTACTCAAAGAAGGACTTAATTCAGATAGCTGCCATTGCAGCAATGTGCATACAGCCAGAAGCTGATTACAGGCCGCTCATGACAGATGTTGTACAATCACTAATACCACTTGTTAGGAACCCATCCTCCCTTAGTTCTAGCTCCCTACGATTTCAGAAACAAACACCAAAGAGCAGAAGCAGCCTAGAAATAAACTAA 1023 0.4604 MEVNTTATVPAGPPAKNHSFTQHRLHSERHRHSHGHFPTKTILITVSFVTLVTVLFVIFVVLFLIRRQKSSSKSGTCKEDRTELHDTSSRLITSSTLNSSPEVKSGCLHGGNLGRTPAPTFRGVQVFTYRELEIATDGFSERNVIGGNGGHGLMYRGVLSDGTLAAIKLLRSEGKQGERAFRIESEYYKCPISSVIWKRPALSSFSNQSQYATGKLTTKSDVYSYGVVLLELLTGRVPVDIKRAQGEHVLVSWALPRLTNREKVIEMVDPALRGQYSKKDLIQIAAIAAMCIQPEADYRPLMTDVVQSLIPLVRNPSSLSSSSLRFQKQTPKSRSSLEIN 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01364 340 Gene3D Phosphorylase Kinase; domain 1 114 186 - -
Vian3g01364 340 SUPERFAMILY Protein kinase-like (PK-like) 131 318 IPR011009 -
Vian3g01364 340 Gene3D Transferase(Phosphotransferase) domain 1 187 313 - -
Vian3g01364 340 PANTHER OS01G0750732 PROTEIN 37 187 - -
Vian3g01364 340 Pfam Protein tyrosine and serine/threonine kinase 213 309 IPR001245 GO:0004672|GO:0006468
Vian3g01364 340 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01364 Vian-Chr3 15054473 15057374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01364 210 323 Receptor kinase-like Gene Family AT3G58690 73.913 3.50e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vian3g01364 PK_Tyr_Ser-Thr 8.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01364 - - csav:115720054 321.242