Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01359 ATGTATATGTACATATATGTGTGGCTTCTGCAGCTTTTGAGCCTCAGTGGGATATTGACTATTTTCTTCTGTGGCATTGTTATGTCACACTACACTTGGCACAATGTTACATTAAGCTCAAGGACAACAACCAAGCACGCCTTTGCAACCCTCTCATTCATTGCAGAAACTTTTATATTTATATGTGTTGGCATGGATGCTCTAGACATTGACAAATGGAAAAGCAGTAAAGGCAGTGCAGGAATTTCAGTTGCTGTGAGTTCTACTTTGTTTGCATTAGTGTTGATTGGAAGAGCAGCTTTTGTGTTCCCTATTGCATACATTAAAAATCGTATCAATACAAGAGAGAATACCAGAATTGAATTTCGTTCACAGTTTATCATATGGTGGGCTGGCCTGATGAGAGGTGCAGTGACTATTGCCCTATCTTATAACCAGTTTGCAGAAGCCAAGAGTACATCATCAACTCAAGACTCTGCCTTAATGATCACTTCTTCTATAATTGTGGTCTTGTTCAGCACTGTGGTATTTGGCTCCATTACTAAGCCACTGATAGAGGCTGTGCAACCAAGGCATCCAAAACCAACCAGTTTTGATTCCACTGATAACGTAGAAGATTTGAGATTCCTATTGCTTGAAAATAATGGTCCCATTAACCAAAGCAACAATATGCAAATTCAAAGGCAAAGTAGGATAAGGATGCTAATAAGCCATCCAAGCAAAACTGTTCACTACTTTTGGAGGAAATTCGATGACAAGTTTATGAGACCTGTGTTTGGTGGAAGGGGTTTTGTGCCTTTTGTTCCTGGCGAAGCAGCAGAGATTTTTTGA 831 0.3971 MYMYIYVWLLQLLSLSGILTIFFCGIVMSHYTWHNVTLSSRTTTKHAFATLSFIAETFIFICVGMDALDIDKWKSSKGSAGISVAVSSTLFALVLIGRAAFVFPIAYIKNRINTRENTRIEFRSQFIIWWAGLMRGAVTIALSYNQFAEAKSTSSTQDSALMITSSIIVVLFSTVVFGSITKPLIEAVQPRHPKPTSFDSTDNVEDLRFLLLENNGPINQSNNMQIQRQSRIRMLISHPSKTVHYFWRKFDDKFMRPVFGGRGFVPFVPGEAAEIF 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01359 276 PANTHER SODIUM/HYDROGEN EXCHANGER 4 259 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Vian3g01359 276 Pfam Sodium/hydrogen exchanger family 2 186 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01359 Vian-Chr3 14987885 14990017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01359 4 274 Antiporters AT5G27150 57.353 4.98e-109 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01359 K14724 - ccaj:109808105 387.497