Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01347 ATGGAGTGCAACAAAGATGAGGCTGTGAGGACTAGGAAAATGGCCGAAGCTAGAATGCAAAGTGGTGATTTTGTGGATGCACTCAGATTGGCTACCAAGGCTAAAAAGCTGTATGCTGATTACGCTGGTGCAGAAGCTGCTTTCAAGTTGATTGGGCAAGCCAATGGGGTCTTGAGTGACCAAGAAAAACGTTCTTTGTATGACAGCCGGTTCGGAATCTCTGTAAGAGGTGCTGCGAAGAAATCCACTGCAAAACGTGGTGCAGAAAAATGTCAGAGAAGTTCTGAATCACAACGTAGTTCACATGAGAATGTGTTCACTGCAAAGCGTGATGAGCATGCAACAAATTATCAGAAGAATTCTTACCCTAACTCCGCTGATTCCAACAACCAAGCTGGGCCGACATTCTGGACAACTTGCCCACATTGTAGTGTTAAGTTCGAGTACTCCATACGATATGCGTTTGTGCGGTCAGATACTACATCTATGAAAAAATGTGCTGCTGGAGTTGGTGCTCATTGTGAAAAGAGTAAAGATGGCTCTGTTCCTGCATCCAAAGTCATGGAGCCACAATGCTCTAAAAATGTTGGAAGTAAGAGAGTAAGACAGTCAGCACCAGATGCAGGAAAAAGCTTCAAAGATAGAAACAGTGGTGAGATGAGAGATGCTAATGTTCAAGAAAATGATCTTGATCATTCAAGAGCTGGTGCAAGGAGATCTTCAAGGAAAAAACAGCGTGTTTCATATACCGAAACCTCTGAAGATGAAGATCTTGAATTTCCTTCCAAATCGCCACGACAAAATGAACCGCCTAAAACCGATGACGTTGAGAATAAGACTGTTCCGGCAACAAATGGAGCGTCCAACAGCAACAATCCAGCTACTTCAACTGCTGGTGTGGCTGATCAGAACACGGAGAATGTATCCGAGTCAAAAGAGCATAACTGCCCTTCACCGGATTCAAATATTCCTTCTAGTCCAAACATCCTTTCTTGTTTTGACGCAGAATTCAATGATTTCGAAATGGACAAGGAGGCGGATCGCTTTGGTGTTAATCAAATATGGGCAGCGTATGATAGCGGTGATGCGATGCCAAGGTTTTATGCTATAGTCAAGAAAGTGCTTTCCCCTTTCATGTTGAAGATTACTTGGTTGGAGGCTGATCCAGATGACGACGAAGAGCTTGATTGGCAGGATGCAGATTTGCCTATTGCCTGCGGTAAGTTCAGACTTGGTAGTTCTCAGAAAACTACAGATCGTACTATGTTCTCTCATCAGGTGCGGTGTGTAAAAGAAACTGGCAGAGGTTCTTATATGGTATATCCCCGTAAAGGAGAAACATGGGCAATTTTCAGAGATTGGGATATCAACTGGAGTTCTGATCCAAATAAACATTTAGCGTATGACTATGACTATGTGGAGATCTTATCAGACTTTTCTGAAAACGTGGTCATCGCTGTTGCCTATCTGGGCAAAGTGAAAGGATTTGTTAGCCTCTTTCAGCAAACTTCAGAGAATGGAGCGGTCAATTTTTATGTCCGGCCTCATGAGCTTTATAGGTTCTCGCATCAAATTCCTTCTTATAAGATGTCTGGTAATGAGAGGGAGGGTGTTCCAAGAGGATCTTTTGAATTTGATCCTGCTGCCTTGCCTTCTAATCTCTTTGAAGTTGGTGATTCGGGTAATTTGAAGATGAATAGCTGA 1704 0.4308 MECNKDEAVRTRKMAEARMQSGDFVDALRLATKAKKLYADYAGAEAAFKLIGQANGVLSDQEKRSLYDSRFGISVRGAAKKSTAKRGAEKCQRSSESQRSSHENVFTAKRDEHATNYQKNSYPNSADSNNQAGPTFWTTCPHCSVKFEYSIRYAFVRSDTTSMKKCAAGVGAHCEKSKDGSVPASKVMEPQCSKNVGSKRVRQSAPDAGKSFKDRNSGEMRDANVQENDLDHSRAGARRSSRKKQRVSYTETSEDEDLEFPSKSPRQNEPPKTDDVENKTVPATNGASNSNNPATSTAGVADQNTENVSESKEHNCPSPDSNIPSSPNILSCFDAEFNDFEMDKEADRFGVNQIWAAYDSGDAMPRFYAIVKKVLSPFMLKITWLEADPDDDEELDWQDADLPIACGKFRLGSSQKTTDRTMFSHQVRCVKETGRGSYMVYPRKGETWAIFRDWDINWSSDPNKHLAYDYDYVEILSDFSENVVIAVAYLGKVKGFVSLFQQTSENGAVNFYVRPHELYRFSHQIPSYKMSGNEREGVPRGSFEFDPAALPSNLFEVGDSGNLKMNS 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01347 567 MobiDBLite consensus disorder prediction 244 276 - -
Vian3g01347 567 MobiDBLite consensus disorder prediction 206 236 - -
Vian3g01347 567 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 558 - -
Vian3g01347 567 Pfam Domain of unknown function (DUF3444) 328 534 IPR024593 -
Vian3g01347 567 MobiDBLite consensus disorder prediction 84 116 - -
Vian3g01347 567 MobiDBLite consensus disorder prediction 172 327 - -
Vian3g01347 567 MobiDBLite consensus disorder prediction 278 327 - -
Vian3g01347 567 MobiDBLite consensus disorder prediction 84 130 - -
Vian3g01347 567 SUPERFAMILY Chaperone J-domain 33 71 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01347 Vian-Chr3 14876167 14878239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01347 44 153 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 30.000 2.58e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01347 - - ccaj:109790324 623.624