Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01338 ATGCCTGTTCCCAACGGCGAAGAGCAAGTTCTGTTTGCTTCGGAAAATGCAAGTGAGGTTTCAAAGTCACCCTCGTTGGATTTGAACCCAGATTCAGATTCAGTTGATGGGTCCCCACCTGTTTCCACCGTTTACACTGATGTGGGTGTCGTGCCAGAACACCAAAAGAACGAGCTTGAGCACTTTATATCCAATTTAGAAAGAGAAATAGAGGAGTTGAGGGTCAACCAGAAGAAATTGGATAAAAAGCGTAGAGAAGCACTGAGCAAGATATTGGACATCAAAGGGAGCATTCGAGTATTTTGTAGAATTCGACCAAATCTGGTAACGGAGAAGAGAAGAATTGCTGAACCGGTATCAGCTGGACCAGAAAAAATTCGGGTTAAGTGGGGAGGAACAAAGAAAGATTTTGAGTTTGATAAAGTTTTTACTCAAGAAACAAGCCAAGAAAGTGTTTTTGTTGAGGTTGAGCCAATTCTGAGATCTGCAATGGACGGGCACAATGTATGTGTGTTTGCTTACGGTCAAACAGGCACAGGCAAGACATTCACCATGGATGGTACAAACGAGCAACCTGGGATTATTCCGCGTGCTCTTGAAGAGCTCTTTCATCAAGCCTCTTTGGATAGCTCATCTCCTTTCACCTTTTCGATGAGCATGTTAGAAGTTTATATGGGCAATCTCAGGGATTTGCTAGCTCCAAAACCGTCTGGTAGACCACATGAACAACCTATGACGAAGTGCAATCTCAATATCCAAACCGATCCAAAGGGGTTGATTGAAATTGAGGGTCTCTCTGAAGTTCAAATAAGTGATTATGCTAAAGCGAAATGGTGGTACAACAAGGGTAGAAGGTTCAGATCCACCTCGTGGACTAATGTGAATGAAGCATCAAGCAGGTCACACTGCTTAACGAGGATAAGCATATTTCGACGTGGGGATGCTTTGGAAGCTAAAAGTGAAGTAAGCAAACTGTGGATGGTTGATCTTGGTGGCAGCGAACGGTTGCTTAAAACTGGAGCCAAAGGACTGACACTGGATGAGGGCAGAGCCATTAATCTTTCTCTTTCAGCTTTAGCTGATGTTGTTGCAGCTTTGAAAAGGAAGAGGGGCCATGTGCCTTACAGGAATAGCAAGCTGACTCAATTACTCAAAGATTCTCTTGGGTATGGCTCAAAGGTTTTGATGCTCGTGCATATAAGCCCATCTGAAGAAGATGTCTGTGAGACAATTTGCTCCTTGAACTTTGCAAAGAGAGCGAGAGCAATAGAGTCCAACAAAGAAGTGTCCATGGAAGTGAAGAAGCAAAGGGAGAAGAAGATTATGGAGCTAGAGGAAGACATCAAGGAAGCTGAAAAACAACGGCAGAATTTAAGGGAACAAACAGAGAAGATTGAGTTGAAGTTAAATGATAGTAAAAAGCTCATATCAATGACAGATAGTCCTGTGGAAAGTGATGACATGAAAGCCTCAATTAGTCCCCAAGATGATGTGAAAGAGGTGATTGAAACTCCCAAAGCATCTAAGAAGCCCATCAAAAGAAACTTCTCCAACTCAATGCCTCGATTCATGACTTCAACAGTGGCAAGTCGCCAAAGGCAAAGTGCTGCAGAGCGAGACATTGGCACTGTGAAATTGAAAAGCCATAGATCAACAATGGTGTCGAGAAGTTCCATCCATTTTTCGTATTCCCAATCGTTGAGTTATTCAGATATCCGCATCAAAGCATTGCTGCGAAGTTCAAATGGAAAATCTCGGCATGCTGAAGCAGATAGTGTTCCAATTCCGGAGCCTGTTCTCACAGAAAGGCCTAAATGCAATGATTTGGAATCAAAAGTCACAACCCCTCGAAGCAGGATGGTTACATCTTCTGACCAAAGCTTGAGATTTTCGCTGGGTCGTCACAGAAGAAGGATGTCTGATCTGATCTGA 1932 0.4322 MPVPNGEEQVLFASENASEVSKSPSLDLNPDSDSVDGSPPVSTVYTDVGVVPEHQKNELEHFISNLEREIEELRVNQKKLDKKRREALSKILDIKGSIRVFCRIRPNLVTEKRRIAEPVSAGPEKIRVKWGGTKKDFEFDKVFTQETSQESVFVEVEPILRSAMDGHNVCVFAYGQTGTGKTFTMDGTNEQPGIIPRALEELFHQASLDSSSPFTFSMSMLEVYMGNLRDLLAPKPSGRPHEQPMTKCNLNIQTDPKGLIEIEGLSEVQISDYAKAKWWYNKGRRFRSTSWTNVNEASSRSHCLTRISIFRRGDALEAKSEVSKLWMVDLGGSERLLKTGAKGLTLDEGRAINLSLSALADVVAALKRKRGHVPYRNSKLTQLLKDSLGYGSKVLMLVHISPSEEDVCETICSLNFAKRARAIESNKEVSMEVKKQREKKIMELEEDIKEAEKQRQNLREQTEKIELKLNDSKKLISMTDSPVESDDMKASISPQDDVKEVIETPKASKKPIKRNFSNSMPRFMTSTVASRQRQSAAERDIGTVKLKSHRSTMVSRSSIHFSYSQSLSYSDIRIKALLRSSNGKSRHAEADSVPIPEPVLTERPKCNDLESKVTTPRSRMVTSSDQSLRFSLGRHRRRMSDLI 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01338 643 Pfam Kinesin motor domain 127 423 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian3g01338 643 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 464 IPR027417 -
Vian3g01338 643 Coils Coil 56 90 - -
Vian3g01338 643 ProSiteProfiles Kinesin motor domain profile. 97 423 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian3g01338 643 MobiDBLite consensus disorder prediction 15 41 - -
Vian3g01338 643 MobiDBLite consensus disorder prediction 582 602 - -
Vian3g01338 643 SMART kinesin_4 95 431 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian3g01338 643 PRINTS Kinesin heavy chain signature 292 309 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian3g01338 643 PRINTS Kinesin heavy chain signature 373 394 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian3g01338 643 PRINTS Kinesin heavy chain signature 324 342 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian3g01338 643 PRINTS Kinesin heavy chain signature 166 187 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian3g01338 643 PANTHER KINESIN-LIKE PROTEIN KLP-3 57 564 IPR027640 GO:0003777|GO:0007018
Vian3g01338 643 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 50 425 - -
Vian3g01338 643 Coils Coil 434 475 - -
Vian3g01338 643 Gene3D Kinesin motor domain 92 469 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01338 Vian-Chr3 14771181 14774124 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01338 69 423 Calmodulin-binding Proteins AT5G65930 40.443 5.82e-71 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01338 - - gmx:100785581 1094.72