Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01332 ATGGCTTTTTCTCACGACTTGGAGGTGGAATCCTCTTCTCCCCCTCTTGTGTTTGACGTGCGGAGGAGCGAACCAGAGCTGGTGGCTCCGGCCAAGCCCACTCCCCGCGAGAACAAGCTGCTATCAGACATAGACACCCAAGCGGGCCTCCGAATCCAAATTCCAATCATACAGTTCTACAGAAACAACCAATCAATGGCAGGGAAGGACCCGGTTAAAGCCATTAGACACGCTCTCGCTGAAACCCTAGTTTTCTACTACCCGTTGGCTGGAAGGATTAAGGACGGTCCTGACGGAAGCCTGGTGGTGGATTGCAACGAGGAGGGTGTGATGTTCATCGAGGCCGATGCTGATATTACACTCCAACAATTCGGTCACACTATTAAACCCCCTTTCCCGAACTTCGAAGAACTCCTTTACCAACCTCCCGGTTCGGAAGCGGTCACTAATACACCCATTTTTATTATACAGGTGACGCGTTTGAAGTGCGGTGGTTTCATCTTGGCGCTCCGTTTCAACCACACCATAGTCGACGGAGTTGGCGTCTTTCAGTTCGCAACTACCATGGCAGGGATAGCTCGGGGAGTCTTGCAAGAACCTCCATTCGAACCTTTGTGGCATAGGGACCTTCTCAGAGCCAGGGACCCGCCACGTGTCACATTCAACCATCGGGAGTACGAGCAACTCACAGACTCCGGCGACGCCGTTCAACAGAACTTCGAGCAACGGTCATTCTTCTTCGGCCCGGCCGAAACTGCCGCCATCCGCGCCCTCCTCCCCCGTGACCTCGACCAGCACGCCACCACCTTCGAGGTGTTGACGTCTTACGTCTGGCGCTGCCGCACAAGAGCGCTTCAGTTCAATCCGAAGGAGGACGTCCGAATGATGTGCATCGTGGATGCGCGCGGCAAGTTCACGTCGGCCTTACTGACTAATTATTATGGTAGCTGCTTCGGGTTTCCGGCATCTGTGGCCGCCGCCGGAGAGCTTTCCTCGGAGCCGTTGGAGTATGCGGTGAGGCTGATACAGAAGGCAAGGAGCGAGGTGAGCGAGGAGTATGTTCACTCGGTGGCGGATCTGATGGCGACTTCGGGAAGGCCTTTGTTTACTGTGGTGAGGTCGTGTCTGGTTTTGGATACGACGGATATTGGATTTAGAGATTTGGATTTGGGGTGGGGGAAGGCGGTGTATGGAGGAATGGCCGTTGCTGGTGCTGGGACGTTTCCTGCAGTGAACTTTCATGTCCCTAGTCAGAACGCGAAGGGAGAGGAAGGGATTATGGTTTTGGTTTCCTTGCCTTCACAGGTTATGAAAATCTTTGCCAAAGAGTTGGATGACAATTTGGTTAAGACCAACACAACAATCTAG 1368 0.5358 MAFSHDLEVESSSPPLVFDVRRSEPELVAPAKPTPRENKLLSDIDTQAGLRIQIPIIQFYRNNQSMAGKDPVKAIRHALAETLVFYYPLAGRIKDGPDGSLVVDCNEEGVMFIEADADITLQQFGHTIKPPFPNFEELLYQPPGSEAVTNTPIFIIQVTRLKCGGFILALRFNHTIVDGVGVFQFATTMAGIARGVLQEPPFEPLWHRDLLRARDPPRVTFNHREYEQLTDSGDAVQQNFEQRSFFFGPAETAAIRALLPRDLDQHATTFEVLTSYVWRCRTRALQFNPKEDVRMMCIVDARGKFTSALLTNYYGSCFGFPASVAAAGELSSEPLEYAVRLIQKARSEVSEEYVHSVADLMATSGRPLFTVVRSCLVLDTTDIGFRDLDLGWGKAVYGGMAVAGAGTFPAVNFHVPSQNAKGEEGIMVLVSLPSQVMKIFAKELDDNLVKTNTTI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01332 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 26 445 - -
Vian3g01332 455 Pfam Transferase family 22 444 - -
Vian3g01332 455 Gene3D - 224 444 IPR023213 -
Vian3g01332 455 Gene3D - 17 223 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01332 Vian-Chr3 14686587 14688225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01332 27 444 Monolignol Biosynthesis Gene Families AT5G48930 29.263 3.33e-50 174