Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01319 ATGAATGGGGTCACACACCTTGAACCAGATGACTCTGAGTTTGTTGAAGTTGATCCAACTGGCAGATATGGCAGATACAATGAAATCCTAGGAAAAGGAGCTTCAAAGACAGTATATAGGGCATTTGATGAGTATCAAGGGATTGAAGTTGCTTGGAACCAGGTCAAGCTGTATGATTTTCTGCAAAGTCCTGAAGATCTTGAGAGGCTTTATTGTGAAATTCATCTCCTGAAAACATTGAAGCACAGGAACATTATGAAATTCTACACTTCTTGGGTTGATACTGCTAATAGGAATATCAACTTCGTGACTGAAATGTTCACCTCCGGTACACTTAGACAGTATAGGCTAAAGCACAAGAGAGTTAACATCAGAGCAGTGAAGCATTGGTGTAGACAGATCTTGAATGGACTTCTCTATCTTCATAGTCACGATCCCCCTGTGATCCATAGAGATCTAAAATGTGATAACATATTTGTCAATGGAAACCAAGGGGAAGTGAAGATTGGGGATCTTGGTTTGGCAGCAATTCTCCGGAAATCTCATGCAGCTCATTGTGTAGGGACGCCAGAGTTCATGGCCCCTGAAGTATATGAAGAGGCGTATAATGAGCTAGTTGACATCTATTCCTTTGGGATGTGCATATTAGAGATGGTCACATTCGAATATCCTTATAGTGAATGTACTCATCCAGCTCAAATCTATAAGAAAGTTGTTTCTGGGAAAAAGCCAGATGCTTTATATAGAGTGAAGGATCCGGAGGTGCGACAATTTGTTGAAAAATGCTTGGCCACGGTGTCTCTTAGGCTTTCTGCAAGGGAGCTTCTAGATGATCCATTTCTTCGAATTGATGATTATGAATATGATACGAGAACTGTAGAAAATGGAGAATTGGATGAATTTGGTCCTCTCATCAGACAGCCATTCTTTGATCTTCATCGAAGCTACAGTAACTTCAGTAATGAATACTCAAATGGCTTTGGGTATGAAGGAGACTGGTGTCCTCATCCGGCTGAGATTGAACCAAGTGGAATTGAACTTTTTGAGTACCATGATGATGAACCCTCTGAAGATGTTGACATAAGCATCAAGGGCAAGAGGAAAGATGATGGTGGCATCTTTTTGAGACTAAGAATTGCTGATAAAGAAGGTCGCATCCGAAATATTTATTTCCCATTTGACATAGAGACGGACACAGCAATAAGTGTGGCAACTGAAATGGTTGCAGAGCTGGACATTACTGATCAGGATGTTACCAGAATAGCTGATATGATTGATGGGGAAATTGCTTCCTTGGTACCTGAATGGAGACCGGGACCAGGAATTGACGAAACTCCCCGTTTTGCAAATCAAGGTTTCTGTCACAATTGTGTGTCTAATCATACTTCTAGCGGCTCTTTTTTGGATTTTCTCTCACACAATCCAGGTGACAAGAACCTGCAACTAGGGTGTTGTAGGCATGGATGTGCTTCAATGCATGGGCGCTTTGAGGAGATTACCTTCCAATCTGAAGAGTATGACAACCATGCTAGAGGGGATCTGAACATATCAAGCCAGTTAGACAGCTTGCAGTATCAGGAGTTATGGAATCAGCACGAAAGTCGTGAACTGAGTCCAGTAGAGTCTGATCAAAGCCATTCTGACGAACAATGCGAACAATTAGATAAACTACTTCCAGCTAAGGATAAAGAACATGATGTTTGGGAAAACAAGGTTTCATTCAGTGCTGCAAATTCTCGAAGAAATTTATCTGGAAGTCATGACTTCTCTACTATCCAATCTGCCTACTGTGACCTAGGAGATGACTATGAGAAAGAGATCCAAAAGGAACTCAGATGGCTAAGAGCCAAGTACCAAATGGAATTAAGGGATCATAAGGACCGACAGTTTGAGCAATCTTCACACAGTACTAACAAAGAGCACAAAACAGAAAATGGCTTCTTGTCACCTTCACTGACAGAAACATCATTAAAAGAAGGTAACAATGGGACTCAGATGAAACCTCCTACTAATAAGTGTCATTATGATTCTAATAACCACGCTCATGTCCATGAAAGCAGCCCCAATTCGGACACCCAAAGGGCCCAAAATTGTGAGGCGACAGAATCCCCTGGCAAAGGTATGGTTACTGCAAAGAGTTTTTATACTGGCTCATTGCTTCCACACTCTCTGCACAGGACAGTTTCCCTACCAGTTGATGCTGTTGATATATAA 2214 0.4155 MNGVTHLEPDDSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILNGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDALYRVKDPEVRQFVEKCLATVSLRLSARELLDDPFLRIDDYEYDTRTVENGELDEFGPLIRQPFFDLHRSYSNFSNEYSNGFGYEGDWCPHPAEIEPSGIELFEYHDDEPSEDVDISIKGKRKDDGGIFLRLRIADKEGRIRNIYFPFDIETDTAISVATEMVAELDITDQDVTRIADMIDGEIASLVPEWRPGPGIDETPRFANQGFCHNCVSNHTSSGSFLDFLSHNPGDKNLQLGCCRHGCASMHGRFEEITFQSEEYDNHARGDLNISSQLDSLQYQELWNQHESRELSPVESDQSHSDEQCEQLDKLLPAKDKEHDVWENKVSFSAANSRRNLSGSHDFSTIQSAYCDLGDDYEKEIQKELRWLRAKYQMELRDHKDRQFEQSSHSTNKEHKTENGFLSPSLTETSLKEGNNGTQMKPPTNKCHYDSNNHAHVHESSPNSDTQRAQNCEATESPGKGMVTAKSFYTGSLLPHSLHRTVSLPVDAVDI 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01319 737 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 683 - -
Vian3g01319 737 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g01319 737 MobiDBLite consensus disorder prediction 626 642 - -
Vian3g01319 737 MobiDBLite consensus disorder prediction 626 707 - -
Vian3g01319 737 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g01319 737 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 374 428 IPR024678 GO:0004674|GO:0005524
Vian3g01319 737 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Vian3g01319 737 CDD STKc_WNK 22 281 - -
Vian3g01319 737 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Vian3g01319 737 Gene3D - 371 436 - -
Vian3g01319 737 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Vian3g01319 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Vian3g01319 737 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Vian3g01319 737 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Vian3g01319 737 FunFam probable serine/threonine-protein kinase WNK9 371 455 - -
Vian3g01319 737 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g01319 737 MobiDBLite consensus disorder prediction 643 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01319 Vian-Chr3 14596198 14599174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01319 127 736 MAP Kinase Kinase Kinase AT3G04910 53.692 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Vian3g01319 Pkinase 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01319 K08867 - gmx:100272198 1409.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01319 3 14596198 14599174 Vian3g01319 3 14596198 14599174 ECH
Vian6g00931 6 26566163 26569201 Vian3g01319 3 14596198 14599174 PCT