Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian3g01265 | ATGGACCAAGTCCTTCTTGACGACATAATCAATCGCCTTCTCGAAGTTCGTGGCCGACCGGGGAAGCAGGTGCAGCTGTCGGAGTCCGAGATCCGCCAGCTCTGTACCGCTTCCAGAGATATTTTCTTGCAACAACCTAATTTATTGGAGCTCGAAGCACCGATTAAGATTTGCGGTGATGTACACGGTCAATATTCTGATCTTTTAAGGCTTTTTGAGTATGGTGGATTACCTCCTGAGGCTAACTACTTATTTTTGGGGGATTATGTGGATCGAGGGAAGCAGAGTTTGGAAACAATATGCCTTCTCCTAGCTTATAAAATAAAATATCCTGAGAACTTTTTTCTTTTGAGGGGTAACCATGAATGTGCATCTATTAACCGTATATATGGATTTTATGACGAGTGTAAAAGAAGGTTCAATGTAAGGTTATGGAAGACATTTACCGAGTGCTTCAATTGCCTGCCTGTGGCAGCACTCATTGATGAAAAGATATTGTGCATGCATGGGGGCCTTTCTCCTGATTTACATAATTTGGATCAAATTAGAAATCTACTACGGCCCACTGATGTGCCTGATACAGGTTTGCTTTGTGATCTCCTCTGGTCAGATCCAAGCAAAGAGGTTCAAGGTTGGGGAATGAATGATAGGGGAGTTTCATATACATTTGGTGCTGATAAGGTCTCGGAGTTTCTTCAGAAACATGATTTGGATCTTATTTGTCGTGCTCATCAGGTGGTGGAGGATGGGTATGAGTTCTTTGCTAACCGACAGCTTGTAACAATATTTTCGGCACCTAATTATTGTGGGGAGTTTGACAATGCCGGTGCTATGATGAGTGTTGATGAGACACTGATGTGCTCTTTCCAAATATTGAAGCCAGCTGATAAAAAAGCAAAGCTCAACAGTACTACCACTACTAAGCCAGGAAACTCCCCAGCAGGTGTAAAGTCTTTCATGGGTACAAGAGTATGA | 975 | 0.4267 | MDQVLLDDIINRLLEVRGRPGKQVQLSESEIRQLCTASRDIFLQQPNLLELEAPIKICGDVHGQYSDLLRLFEYGGLPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTECFNCLPVAALIDEKILCMHGGLSPDLHNLDQIRNLLRPTDVPDTGLLCDLLWSDPSKEVQGWGMNDRGVSYTFGADKVSEFLQKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKAKLNSTTTTKPGNSPAGVKSFMGTRV | 324 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian3g01265 | 324 | Pfam | Calcineurin-like phosphoesterase | 54 | 246 | IPR004843 | GO:0016787 | |
Vian3g01265 | 324 | Gene3D | - | 1 | 305 | IPR029052 | - | |
Vian3g01265 | 324 | Pfam | Serine-threonine protein phosphatase N-terminal domain | 6 | 52 | IPR031675 | - | |
Vian3g01265 | 324 | ProSitePatterns | Serine/threonine specific protein phosphatases signature. | 117 | 122 | IPR006186 | GO:0016787 | |
Vian3g01265 | 324 | MobiDBLite | consensus disorder prediction | 300 | 324 | - | - | |
Vian3g01265 | 324 | PRINTS | Serine/threonine phosphatase family signature | 83 | 110 | IPR006186 | GO:0016787 | |
Vian3g01265 | 324 | PRINTS | Serine/threonine phosphatase family signature | 150 | 176 | IPR006186 | GO:0016787 | |
Vian3g01265 | 324 | PRINTS | Serine/threonine phosphatase family signature | 236 | 256 | IPR006186 | GO:0016787 | |
Vian3g01265 | 324 | PRINTS | Serine/threonine phosphatase family signature | 258 | 274 | IPR006186 | GO:0016787 | |
Vian3g01265 | 324 | PRINTS | Serine/threonine phosphatase family signature | 54 | 81 | IPR006186 | GO:0016787 | |
Vian3g01265 | 324 | PRINTS | Serine/threonine phosphatase family signature | 179 | 206 | IPR006186 | GO:0016787 | |
Vian3g01265 | 324 | PRINTS | Serine/threonine phosphatase family signature | 116 | 140 | IPR006186 | GO:0016787 | |
Vian3g01265 | 324 | SMART | pp2a_7 | 26 | 296 | IPR006186 | GO:0016787 | |
Vian3g01265 | 324 | SUPERFAMILY | Metallo-dependent phosphatases | 17 | 300 | IPR029052 | - | |
Vian3g01265 | 324 | PANTHER | SERINE/THREONINE PROTEIN PHOSPHATASE | 9 | 303 | - | - | |
Vian3g01265 | 324 | CDD | MPP_PP1_PPKL | 6 | 294 | - | - | |
Vian3g01265 | 324 | FunFam | Serine/threonine-protein phosphatase | 1 | 303 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian3g01265 | Vian-Chr3 | 13997625 | 14006938 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian3g01265 | 55 | 239 | Calmodulin-binding Proteins | AT5G63870 | 31.818 | 8.30e-28 | 108 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian3g01265 | K06269 | - | gmx:100799218 | 648.662 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vian3g01265 | 3 | 13997625 | 14006938 | Vian3g01265 | 3 | 13997625 | 14006938 | ECH |