Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01243 ATGTTTCTGATCACTCTTTGGCTTTTACTGGCTCATCATGCCAAAGCTGAAAGTTCCACATATGTAGTTCACATGGACAAGTCGCTCATGCCTCAACTCTTTGCAAGCCATCATGATTGGTATGAATCCATCATCCATTCCATAGACTTGGCAATAGCTGATGATCCATCAAAGCAACAAGAGCTGAAACTAGTGTACACTTATGATAATGCCATGCATGGATTCAGTGCAGTGTTATCATCAGAGGAGTTGGAGAGTCTAAAGAAAGTTGATGGCTTTGTGACAGCTTATCCTGACAGGTCTGCCACCGTAGACACCACACACACCTTTGAGTTTCTGTCATTGGACACCCCCGGAGGAATATGGAATGCTTCAAATTTTGGGGAGGGTGTCATTGTGGGTCTCATAGACACTGGAATATGGCCTGAAAGTGCCAGTTTCAAAGATGATGGCATGAGCAGAAATATCCCATCCAAATGGAAAGGAACATGCGAGCCAGGACAAGACTTTGATGCCTCCATCTGTAACTTCAAATTGATTGGAGCCAGGTACTTCAACAAGGGTGTGAAAGCAGCGAATCCAAATGTCACAATCAGCATGAACTCAGCGAGAGACACTCAGGGTCATGGAAGCCACACATCATCTACTGTTGCTGGCAATTATGTGAATGGTGCCTCTTTCTTTGGCTACGCCAAAGGGGTAGCCAGAGGCGTTGCACCTCGAGCTAGGCTTGCCATGTATAAGGTCCTTTGGGATGAAGGGCGTCAAGCCTCTGATGTTCTTGCAGGAATGGACCAAGCCATTGCTGATGGGGTTGATGTCATTTCCATTTCTTTGGGTTTTGACAGTGTTCCGCTTTATGAGGATCCTGTGGCAATAGCTGCTTTTGCAGCAATGGAAAAAGGGGTTCTGGTTTCATCTTCAGCTGGCAATGAAGGTCCTGATATTGGTACTTTGCATAATGGAATCCCTTGGGTCCTAACAGTTGCAGCAGGCACCATAGACCGAACTTTTGGCAGTTTGGCTCTTGGCAATGGCCAAACCATTGTGGGTTGGACCTTGTTTGCAGCAAACTCCATAGTGGAGAATTTTCCACTTATTTACAACAAGAATCTATCGGCGTGCAACTCGGTTAAACTGTTATCCGAAGCAGCCACAAGAGGGATCATTATATGTGATGCCTTTGACTCAATTTCTGTCCTTGAGCAAATAGATCTTGTTACTGCAGCCAGTGTGGTAGGAGCTGTGTTTATCTCCGAGGATCCACGGCTACTTGAAACAGGACGTTTGTATTCTCCAAGCATTGTGATCAGCCCAAGTGATGCACCATCCGTGATCAAGTACGCAAAAAGTGTTGAGAATCCCTTTGCCAGCATCAACTTTCAACAAACGTTTGTTGGAATAAAGCCAGCACCAGCTGCTGCATATTACACTTCAAGAGGTCCTTCACCAAGCTACCCGGGGATCTTAAAGCCTGATGTAATGGCACCTGGCTCAAATGTTCTGGCTGCTTTTGTTCCAAATAAACCTTCAGCTAGAATTGGCACAAATGTGTTTCTCTCTAGCGACTACAATTTTTTGTCTGGAACATCCATGGCATGTCCTCATGCATCTGGTGTTGCTGCTCTTCTAAAAGCAGCACACCCTGATTGGAGTGCAGCTGCTATAAGATCTGCACTGGTCACCACTGCCAACCCTTTTGACAACACTCAAAGTCCAATTAGGGATAATGGTAACCCATTGCAATATGCTTCTCCTCTTGCCATGGGAGCTGGTGAGATTGATCCTAACAAAGCACTTGATCCAGGTTTCATATATGATGCCACCCCTCAGGACTATGTTAACCTTCTTTGCGCTTTGGGCTACACACAGAACCAGATCCTAACTATCACAAGATCAATTATTTACATATGTGCCGATAACCCATCATCTGATCTTAACTACCCTTCTTTTATAGTCTTGTACAGTAACAAAACAAGATCAACAGTCCAAAAGTTCAGGAGGACCGTGACCAATGTTGGAGATGGTGCTGCTACGTATAGAGTGAAGGTGAAACAACCTAAGGGCGCTGTTGTTAAGGTTTCTCCAGAGACATTGTCATTTGGCTATAAGAATGAAAAGCAAAACTACTCAGTTACCATAAAGTACAGGAGAAATAAGACGGAAAATATCCCATTTGGGGACATTGTTTGGGTTGAAGATGGTGGTGCACGCAAGGTGAGAAGCCCCATTGTTGTGGCACCTAGTGAAATTGCTTAA 2259 0.4475 MFLITLWLLLAHHAKAESSTYVVHMDKSLMPQLFASHHDWYESIIHSIDLAIADDPSKQQELKLVYTYDNAMHGFSAVLSSEELESLKKVDGFVTAYPDRSATVDTTHTFEFLSLDTPGGIWNASNFGEGVIVGLIDTGIWPESASFKDDGMSRNIPSKWKGTCEPGQDFDASICNFKLIGARYFNKGVKAANPNVTISMNSARDTQGHGSHTSSTVAGNYVNGASFFGYAKGVARGVAPRARLAMYKVLWDEGRQASDVLAGMDQAIADGVDVISISLGFDSVPLYEDPVAIAAFAAMEKGVLVSSSAGNEGPDIGTLHNGIPWVLTVAAGTIDRTFGSLALGNGQTIVGWTLFAANSIVENFPLIYNKNLSACNSVKLLSEAATRGIIICDAFDSISVLEQIDLVTAASVVGAVFISEDPRLLETGRLYSPSIVISPSDAPSVIKYAKSVENPFASINFQQTFVGIKPAPAAAYYTSRGPSPSYPGILKPDVMAPGSNVLAAFVPNKPSARIGTNVFLSSDYNFLSGTSMACPHASGVAALLKAAHPDWSAAAIRSALVTTANPFDNTQSPIRDNGNPLQYASPLAMGAGEIDPNKALDPGFIYDATPQDYVNLLCALGYTQNQILTITRSIIYICADNPSSDLNYPSFIVLYSNKTRSTVQKFRRTVTNVGDGAATYRVKVKQPKGAVVKVSPETLSFGYKNEKQNYSVTIKYRRNKTENIPFGDIVWVEDGGARKVRSPIVVAPSEIA 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01243 752 Pfam Peptidase inhibitor I9 20 101 IPR010259 -
Vian3g01243 752 ProSiteProfiles Serine proteases, subtilase domain profile. 109 600 - -
Vian3g01243 752 Gene3D Peptidase S8/S53 domain 130 613 IPR036852 GO:0004252|GO:0006508
Vian3g01243 752 ProSitePatterns Serine proteases, subtilase family, serine active site. 529 539 IPR023828 -
Vian3g01243 752 SUPERFAMILY Subtilisin-like 105 603 IPR036852 GO:0004252|GO:0006508
Vian3g01243 752 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 9 104 IPR037045 -
Vian3g01243 752 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Vian3g01243 752 PRINTS Subtilisin serine protease family (S8) signature 528 544 IPR015500 -
Vian3g01243 752 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Vian3g01243 752 FunFam Subtilisin-like protease SBT1.9 10 105 - -
Vian3g01243 752 Gene3D - 617 748 - -
Vian3g01243 752 CDD Peptidases_S8_3 103 565 IPR034197 -
Vian3g01243 752 Pfam Fibronectin type-III domain 645 746 IPR041469 -
Vian3g01243 752 CDD PA_subtilisin_like 343 459 - -
Vian3g01243 752 Gene3D - 335 466 - -
Vian3g01243 752 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 746 IPR045051 -
Vian3g01243 752 FunFam Subtilisin-like protease SBT1.5 130 342 - -
Vian3g01243 752 Pfam Subtilase family 128 568 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01243 Vian-Chr3 13769725 13771983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01243 2 747 Subtilisin-like Serine Gene Family AT5G67360 42.597 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01243 - - gmx:100806072 1320.84