Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01214 ATGGGCAATCTTTCAAGTCCCAACAGAATATTGGCGTTTCTCTTCCTCACATTGGTCCAAATCCAAAGCAAGGTGTTTTGCTACCAATACAAAGTTGGAGATCTTGATGCTTGGGGCATACCCACCTCAACAAATCCACAAGTCTACAAAAAATGGTCCACATATCACAATCTCACAATTGGAGATTCCCTCCTGTTTCTATACCCACCAAGCCAAGATTCAGTGATTCAAGTTACTGAAGAATCCTACAACAAGTGCAACATCAAAGACCCTATCTTGTACATGAACAATGGAAACTCTTTGTTTAACATTACATCGAAGGGCCAATTCTACTTCACTAGTGGTGTGGCTGGCCATTGCCAAAAGAATCAGAAACTTCATGTAGCTGTAGGTGAAGGAATATCAGAAAATGTGGATGCTGCATCTTCTCCTGCATCTGCACCCTCTTATCCCACAGTATTTGGCAATATTCCAGTAGCTGCTTCTACCTCAACCCCAACCTCAACCTCATCTCAACTCACTTCAACTTTTCAACTTCTCATCATTGGATTTCTGATATCTGCACTCTTTTCTACCCTATGTGATGCCAAAATGCCCTTACCTTTACCATTACAGGCTTAA 621 0.4155 MGNLSSPNRILAFLFLTLVQIQSKVFCYQYKVGDLDAWGIPTSTNPQVYKKWSTYHNLTIGDSLLFLYPPSQDSVIQVTEESYNKCNIKDPILYMNNGNSLFNITSKGQFYFTSGVAGHCQKNQKLHVAVGEGISENVDAASSPASAPSYPTVFGNIPVAASTSTPTSTSSQLTSTFQLLIIGFLISALFSTLCDAKMPLPLPLQA 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01214 206 SUPERFAMILY Cupredoxins 27 130 IPR008972 -
Vian3g01214 206 ProSiteProfiles Phytocyanin domain profile. 28 132 IPR003245 GO:0009055
Vian3g01214 206 PANTHER BLUE COPPER PROTEIN 26 155 IPR039391 GO:0009055
Vian3g01214 206 Pfam Plastocyanin-like domain 45 123 IPR003245 GO:0009055
Vian3g01214 206 Gene3D - 28 142 IPR008972 -
Vian3g01214 206 CDD OsENODL1_like 28 130 IPR041846 -
Vian3g01214 206 FunFam Early nodulin-like protein 1 27 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01214 Vian-Chr3 13408493 13409244 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01214 14 159 Phytocyanin Superfamily AT1G64640 56.463 1.37e-50 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01214 - - gmx:100527517 298.901