Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01199 ATGGCGATGAGCAGAAGCACAAGCCTGGACTCAACAACACACTACACCGATGAGCAGTGGGTGGTGGACATATGTGACACGCTGGTGGCGCTTTCCGCCACCGAACTTGATTTGAAAGATTCTCACCCAGTCTGTATCTGCGAAGTGCCGGAATCGCTGACCTCCACCATGAGGGAAGATTATATCCCTCAGTTTGTAGGGCTTGGCCCTTACCATCACTTCCGAGAAGGCCTCGTCTTCACAGATCACCAGAAGTTGGCCGCAGCCAGAAGGGTCCTCCGTCACTTCCTCCCCAGAAACAGCATCGACCTATTCCAACACCGCATCTCAAACTTTGACACACACATTCAAACCTTCTTCCACCCTGACGTCGCATCCACCTATAATCTTCCCACCCTCTCCTACGTTCTCACCGTCGATGGCTTGTTCGTGCTGGCTTTCATTACGCTTCTCAAAGGTGAAAACCATGAATCGGGATTCTCTTATTTCTTGACCGGAAAACTTGGGATGCCCCTCTTTAACGCCGTCGGTCGAGAGCTCACCGTGAACGCTCTTATCAGGGAGGTTTTCAAGCTTGAAAACCAAATTCCCTTTTATGTTTTCAAGCAGATCAGTGGAGTCAACAACAACGAAATTCATTCAGATTCTATGAGTCTTTCCCTCGCTTCAAGCATGAAAAATTTCTGTAAAAAAGAATGCCCATTTGTCAACTTAAAAGAGCTCCCTGATCGTGTTGCCCTAGAAGGGTATTATCATTTGTTGGACCTCATGTACCATTTAGTTGTTCCTAACCATCAGTCTGAACCTGTATCCCAGCCGGACTCTAAGGTCGAGGCTCAGGATGAACCCGAGGACGAGCCGCAGGTTCCGGCAGAGGCTCCGACTGAGGTTCAGGGTGAAGATCCGGCTGTTGAGACTGAAACCAAGGCTGAGGATAATGTAGCATGCTTTTCCATATGCTACAGAATACTGCTGTTCTTGGTGGCTACATGCATTGTTATCTGGTTTATGATTACGGTCGTTCTGAAGCTGTTCTTATGGGTGATAACTTCTATATTCCGTAAGATTCAACGGGTGTTAGGTTTTTTATTCAGTGTGGTTCTGAAGGCGTTACGCCCTCTATGGGGCGTGGTAGTGGGATTGGGGAAACGCTTGAACCCTGCGCTTTGCTGGTTACACGCTGCCCTAACCAAGTTGGAAGGTAAAGTCAACCATCCGATCCTGAAGCCTTTGACACAAGCGGTTGGACGTCTTGAAGTTATCACGGCAACGATTGAATCAGCAGAATCAGGTGTTCCACGGGTTGTGATGATTCCATCTGTGAAAGAACTGAACGAAGCTGGGATTTTGTTCCGACCGGCTGAAAGTGGCATCTCATCCATTGATTTCGATGAAGGAAAGTGCGTATTTTACTTGCCTTGCATGAGATTGGATGTGAACTCGGAAGTGATAATCAGAAACCTAGTGGCTTACGAGACGTTGATAAAATCCAGTACCCCATTGGTGTTCACGAGGTACGTTGAGTTAATGAGAGCGATTATAGACACTCCTGAGGATGTGAAGATTTTGGTTGACAGCGAAATCATTCATAGCGAGTTGAGGAATGAAGTTATGGCGGACATTTTCAATAGGATGAACAAGCCGATTAGGGCTACGAAGACTCCGAATTTGGATAAAGTGATTTACAAAGTTAACGCCATGTTCGACAGCAAAGAGAAGCATAAAAGGGTTGTGTCCAAGTATACATCTGGATCATTCTTAACAGCCATTGGAGGTCTCTTATTTTTGGCTTTTACGGCTCTCCAAACTTATTGCACCGTTCTCAACTGCTCTTCTTCGTCCAGACTTGTTCAATTTCCTACTCATTTCGATGATTATGCTTCTGCAAAACCCTCTCTCCCCACCCGAGCTTACGATCCCTATAAGGATCTTGATGCTCCAATTCGAAACCTTTACCACCTCCCAACCTCGCCGGAGTTCCTCTTCGTTGAAGAGGCCCGCCGCAAGCGCCGCTCATGGGGCGAGAACCTCACCTTCTACACCGGATGCGGCTACCTGGCCGGAGCCGTTGGCGGTGCGGGCTTAGGACTCGTTGAGGGCGTCAAGGCCTTCGAGTCCGGGGACACAATGAAGCTTCGAATCAACCGCGTCCTGAACGCGGCGAGACACTCGGCAGAATCGAGGCGGCAAGAGACGCGGACGACGTATGAAATAGTGTCCCAGCGGGCTCTGCACCAGCGCACTGTACCGGGCGGCGAGAGGGGTGAGATCAGCGACAGTAGCCGGAGTGGTGGGCAGCGCTGTGGTGGGAGTGGTCGTGGCGGGGAAGCAAGCGTTGAAACAATATGTGCCTATATAAAAGAAAGATCATCACCCGACTTTTTAGATGAAAGTAAAGCAAAGGCATCATGGAGATGGCCTAAGAGGAAAAGCATAATCTTGGATGTGGCAAAGGGGTTGGCCTATTTGCAGTATGGAGTTCAACCTATAATTTTGCATAGGGATATCAAAGCCATCAATTTTGCAGAGGGATATCAAACCTGCAATCAGTAG 2553 0.4853 MAMSRSTSLDSTTHYTDEQWVVDICDTLVALSATELDLKDSHPVCICEVPESLTSTMREDYIPQFVGLGPYHHFREGLVFTDHQKLAAARRVLRHFLPRNSIDLFQHRISNFDTHIQTFFHPDVASTYNLPTLSYVLTVDGLFVLAFITLLKGENHESGFSYFLTGKLGMPLFNAVGRELTVNALIREVFKLENQIPFYVFKQISGVNNNEIHSDSMSLSLASSMKNFCKKECPFVNLKELPDRVALEGYYHLLDLMYHLVVPNHQSEPVSQPDSKVEAQDEPEDEPQVPAEAPTEVQGEDPAVETETKAEDNVACFSICYRILLFLVATCIVIWFMITVVLKLFLWVITSIFRKIQRVLGFLFSVVLKALRPLWGVVVGLGKRLNPALCWLHAALTKLEGKVNHPILKPLTQAVGRLEVITATIESAESGVPRVVMIPSVKELNEAGILFRPAESGISSIDFDEGKCVFYLPCMRLDVNSEVIIRNLVAYETLIKSSTPLVFTRYVELMRAIIDTPEDVKILVDSEIIHSELRNEVMADIFNRMNKPIRATKTPNLDKVIYKVNAMFDSKEKHKRVVSKYTSGSFLTAIGGLLFLAFTALQTYCTVLNCSSSSRLVQFPTHFDDYASAKPSLPTRAYDPYKDLDAPIRNLYHLPTSPEFLFVEEARRKRRSWGENLTFYTGCGYLAGAVGGAGLGLVEGVKAFESGDTMKLRINRVLNAARHSAESRRQETRTTYEIVSQRALHQRTVPGGERGEISDSSRSGGQRCGGSGRGGEASVETICAYIKERSSPDFLDESKAKASWRWPKRKSIILDVAKGLAYLQYGVQPIILHRDIKAINFAEGYQTCNQ 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01199 850 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 40 607 IPR004158 -
Vian3g01199 850 Pfam Plant protein of unknown function 46 585 IPR004158 -
Vian3g01199 850 SUPERFAMILY Protein kinase-like (PK-like) 802 840 IPR011009 -
Vian3g01199 850 Gene3D Transferase(Phosphotransferase) domain 1 775 841 - -
Vian3g01199 850 MobiDBLite consensus disorder prediction 267 305 - -
Vian3g01199 850 MobiDBLite consensus disorder prediction 744 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01199 Vian-Chr3 13270377 13278384 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01199 635 727 Chloroplast and Mitochondria Gene Families AT1G72750 60.417 1.42e-34 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01199 - - pvu:PHAVU_001G079700g 989.949