Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01151 ATGGCTGGGGATGGGAGTGTCGTCCCTGCAGACCCAGGGGCAATGACAGTTGTAAAGAAGAAGACACAGTCTTCAAGGAGTTGGATTCTGATTGATGCTTCTGGACATGGTTCATTGCTCGACGTGGACAAATATGCAATCATGAATCGGGTTCAGATTCATGCGCGTGATCTCAGAATCCTTGATCCCTTGCTCTCTTATCCCTCCACCATTCTCGGTCGTGAGAAGGCTATTGTTCTTAACTTGGAGCATATCAAAGCAATTATAACAGCTGAAGAGGTATTGCTGAGAGATCCAACAGATGAAAATGTGATCCCGGTTGTCGAGGAACTGCAGAGGCGGTTGCCTCGATTAAGTGCCGGTCTTCAACAGCAAGGAGATAGTAAAGAGTATCTTGGAGGCCAAAATGACGCTGAAGCAGCTGAAGAAGATGAGTCACCCTTTGAATTTCGGGCACTGGAGGTTGCTTTAGAAGCCATTTGTAGTTTTCTTGCTGCACGTACAACAGAGTTGGAGATGGCTGCTTATCCTGCATTAGATGAACTTACCTCCAAGATTAGTAGTCGTAATTTGGACAGAGTTCGTAAACTGAAGAGTGCAATGACAAGGCTGACTGCTAGAGTCCAAAAGGTCAGAGACGAGCTTGAACAATTGCTGGATGATGATGATGATATGGCTGACCTATACCTGTCAAGAAAAGGGGGTTCATCATCACCAGTCAGTGGATCAGGTGCTGCAAATTGGTTTGCTGCCTCCCCTACCATTGGATCAAAGATATCTAGAGCCAGTAGAGCAAGTCTAGCAACAGTTCGTTTAAATGAAAATGATGTGGAAGAGCTGGAAATGTTACTAGAGGCTTATTTTAGTGAAATAGATCACACTTTGAACAAATTAACCACGCTGCGAGAGTACATTGATGATACTGAAGATTATATTAATATTCAACTTGACAACCATCGTAATCAGCTGATTCAGCTAGAGCTCTTTCTTAGCTCTGGAACTGTTTGTCTATCTTTCTACGCTTTGGTAACCGCTATATTTGGCATGAATATCCCATATACTTGGAACCAAGACCATGGTTACATGTTCAAATGGGTAGTTATTACCGCAGGAGTATTTTCTGCTTTGACGCTTGTCACGATTACTGCTTATGCTCGCAAAAAGGGATTAATTGGATCTTGA 1182 0.4332 MAGDGSVVPADPGAMTVVKKKTQSSRSWILIDASGHGSLLDVDKYAIMNRVQIHARDLRILDPLLSYPSTILGREKAIVLNLEHIKAIITAEEVLLRDPTDENVIPVVEELQRRLPRLSAGLQQQGDSKEYLGGQNDAEAAEEDESPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKGGSSSPVSGSGAANWFAASPTIGSKISRASRASLATVRLNENDVEELEMLLEAYFSEIDHTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSFYALVTAIFGMNIPYTWNQDHGYMFKWVVITAGVFSALTLVTITAYARKKGLIGS 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01151 393 Pfam CorA-like Mg2+ transporter protein 267 379 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vian3g01151 393 Gene3D Magnesium transport protein CorA, transmembrane region 106 323 - -
Vian3g01151 393 Gene3D - 14 99 - -
Vian3g01151 393 Coils Coil 194 221 - -
Vian3g01151 393 CDD Mrs2_Mfm1p-like 28 390 IPR039204 -
Vian3g01151 393 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 16 391 IPR039204 -
Vian3g01151 393 FunFam Magnesium transporter MRS2-1 16 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01151 Vian-Chr3 12677274 12681117 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01151 1 366 MRS2 Gene Family AT5G64560 80.707 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01151 K16075 - gmx:100810239 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01151 3 12677274 12681117 Vian3g01151 3 12677274 12681117 ECH