Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01150 ATGCACCATGCTGGCTACAGGGAGATAGATATAAAGGCATTAGCGATGACAAGGGAACTCATGAAGGTCAACTTGAGGAAGCTCTCCGAAGCCGTCACATGTTATTTGTGCAATAAATGGTCAGATACTCGTAAGCAAGAATTGAGGGACAAAATTTTCCCATTTCACGATGAAAATGATGAGGAACCTGCCGCCAAATTGTTAGCCAAAATAAAGAAGAATTTAGTTTCTTCATTAAAACCCAATAGAGAAATATCCAAAGCTGGTTTTAAAAAAGTTGTCATTGCCGAAGAAGCAGATATTTCATCTCCCAAACTTGATAAAGTGGAAGGTGATAAGGAAGATGAAAACCAGGGTGATGCTGAATTTGGGGAAGAAGGCGCTACAATTGGATCCGCTAGAAGAGCGAAAGCTGCGGCAAGAATAAAATTCATTTGCTCTGCACAACCTCCGGGACAAGAAAAGACAGAGGGTGATAAGCCTCGAGTTGAAACTTCCAGCGGAACTCTCAAAATCAGAATTCCGAATCTTTCAAAACCAAATACTGAGTTAAGGAATGAAAAGGCTGACATGTTTGAGCCAATAAATAGCCAGGTGGGAGCTGGAAGAAAACGCAAGTCCCGTAGTAATTCCACCATGCAAGAAAATGGTGTCACTTCAGTACTTGTGCACTCTACTGACGATGACCCTCAGGTTGGTATGGTCAAAATCGACAACCATACTCACAAAACTAATGGTAACCAAAACGAGTCAATTCCTTCAAGCTCAGATTCAGTAAAACCTATTGTTAGCACCCGAGAAAAAAGACCAAAAATCTCGGAGGACTTGAATTTCCCAGCACCAGCTGAAACTGATTCCGACAGTGAAAGCAGCAAAGACTTTGGTCCAATCTGGTTCTGCTTGGTTGCTGCAGAAGAGAATAAAGGAAGTGCACCATTGCCACAACTATCTTCGTGCTACCTACGAGTGGAGATCACATTACAAGGGCAGCCAGTTTTATCTTCATGGCAACTGAACAGCTTAGTAGACATCTGGTTGCAAACTGTGCCAAAGAACGAGATTCTGACATCTTTTGGAAGTTCAGCCAAGGATTTTATCATGGTTCTTTCGTATGGTCGAAAGGCTTAA 1128 0.4211 MHHAGYREIDIKALAMTRELMKVNLRKLSEAVTCYLCNKWSDTRKQELRDKIFPFHDENDEEPAAKLLAKIKKNLVSSLKPNREISKAGFKKVVIAEEADISSPKLDKVEGDKEDENQGDAEFGEEGATIGSARRAKAAARIKFICSAQPPGQEKTEGDKPRVETSSGTLKIRIPNLSKPNTELRNEKADMFEPINSQVGAGRKRKSRSNSTMQENGVTSVLVHSTDDDPQVGMVKIDNHTHKTNGNQNESIPSSSDSVKPIVSTREKRPKISEDLNFPAPAETDSDSESSKDFGPIWFCLVAAEENKGSAPLPQLSSCYLRVEITLQGQPVLSSWQLNSLVDIWLQTVPKNEILTSFGSSAKDFIMVLSYGRKA 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01150 375 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 41 323 IPR044807 GO:0004842
Vian3g01150 375 MobiDBLite consensus disorder prediction 202 216 - -
Vian3g01150 375 MobiDBLite consensus disorder prediction 239 261 - -
Vian3g01150 375 MobiDBLite consensus disorder prediction 105 130 - -
Vian3g01150 375 MobiDBLite consensus disorder prediction 195 216 - -
Vian3g01150 375 MobiDBLite consensus disorder prediction 239 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01150 Vian-Chr3 12659071 12662313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01150 322 374 C3H Transcription Factor Family AT3G23060 50.000 8.87e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01150 K16277 - gmx:102669950 256.529