Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01132 ATGGGATTCTATCTTAATCTCAAATTCAAGGCGTTTCGGTTGAAACGGTTTCTGCTTGGACATGGACGCAGAAAAAGAAAGCACAAGGTGGCAAAGAAGCCCTCGTGGATGATGCCAATGACATATGGTTATCATGTGGTGGAACATAATATGAGCAGAGATGATTCTGATAACTCAGACTTTGATTCAGTTGTGGCACAGAGAGAGGAAATGAATCAAACAGAGTTGTGGTATTTTGGAATATTTGATGCACTGATTGGAGACAGGGTTAGCAAGTACATGCAGTCTCATTTCTTTGACAAGAAGCTTCAAGAGACTCGTTTAAGCAGTAAAAGTAAGGAAGCTCTGAAGAGAGCTTACCATGGCGTAAGAGCAAAGATTAGAGAGGAACACAAATTAGAGGAGACATGCAGAATGGGTTCAGCATCTGTTATACTGATCAATGGAGAAAAACTTGTAGTGGCCAACATGGGGGATTACAGAACTGTTGTGTGCAGAGATGGAATAGCTCATCAGACAACTGGCACATACCGACGAATAGAAAAAATGCACTGGTCTCGCCGACTCTTTGCAGGATTCATGCTAGGATGTCAATCAGGAAATGCAAAACATTATAGAGGCTCCGATTTTGCGGTTAGAAGTGAAGTGCTTGATTCTGGTACTGAATTCTTGATATTAGCAAGCAATGGCATATGGGAGGTGATGAAAAACCAAGAGGCTGTGAATCTGATCAGTCACATAGAGGATCCACAGGAAGCAGCTGAATGCTTGGCAAAGGAAGCTTTAATTAGGATGACCAAAAGCAACATCTCATGCTTAATCATTCGTTTTGACTGA 837 0.417 MGFYLNLKFKAFRLKRFLLGHGRRKRKHKVAKKPSWMMPMTYGYHVVEHNMSRDDSDNSDFDSVVAQREEMNQTELWYFGIFDALIGDRVSKYMQSHFFDKKLQETRLSSKSKEALKRAYHGVRAKIREEHKLEETCRMGSASVILINGEKLVVANMGDYRTVVCRDGIAHQTTGTYRRIEKMHWSRRLFAGFMLGCQSGNAKHYRGSDFAVRSEVLDSGTEFLILASNGIWEVMKNQEAVNLISHIEDPQEAAECLAKEALIRMTKSNISCLIIRFD 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01132 278 SUPERFAMILY PP2C-like 39 278 IPR036457 -
Vian3g01132 278 PANTHER PROTEIN PHOSPHATASE 34 276 IPR015655 GO:0004722|GO:0006470
Vian3g01132 278 ProSiteProfiles PPM-type phosphatase domain profile. 58 277 IPR001932 -
Vian3g01132 278 SMART PP2C_4 51 275 IPR001932 -
Vian3g01132 278 Pfam Protein phosphatase 2C 66 173 IPR001932 -
Vian3g01132 278 Pfam Protein phosphatase 2C 217 270 IPR001932 -
Vian3g01132 278 Gene3D - 44 278 IPR036457 -
Vian3g01132 278 CDD PP2Cc 78 277 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01132 Vian-Chr3 12437538 12439377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01132 1 277 PP2C-type Phosphatase Gene Family AT3G23360 45.907 1.69e-76 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01132 K19704 - gmx:100785227 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01132 3 12437538 12439377 Vian3g01132 3 12437538 12439377 ECH