Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01130 ATGCCTTTCAAGAGGTACGTTGAGATCGGGAGGGTTGCTCTCGTCAACTACGGCAAGGAATATGGGAGGCTCGTCGTCATCGTCGACGTCATTGATCAGAACAGAGCACTTGTCGATGCCCCAGATATGGTGAGAACTCAAGTCAATTTCAAGAGGCTTTCCCTAACCGATATTAAGATTGAGATTAAGAGGGTCCCCAAGAAGAAAGATCTTGTTAAAGCCATGGAGGCTGCTGATGTTAAGAACAAATGGGAAAACAGCTCATGGGGCAGGAAACTCATTGTCAAAAAGAGAAGGGCAGCCCTCACTGACTTCGACAGGTTCAAGCTAATGTTGGCCAAGATCAAGAGGGCAGCTGTTGTAAGGCAAGAAATCTCTAAGCTGAAAAAGAGCGCGTAG 399 0.4687 MPFKRYVEIGRVALVNYGKEYGRLVVIVDVIDQNRALVDAPDMVRTQVNFKRLSLTDIKIEIKRVPKKKDLVKAMEAADVKNKWENSSWGRKLIVKKRRAALTDFDRFKLMLAKIKRAAVVRQEISKLKKSA 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01130 132 FunFam 60S ribosomal protein L14-1 1 84 - -
Vian3g01130 132 Pfam Ribosomal protein L14 45 117 IPR002784 GO:0003735|GO:0005840|GO:0006412
Vian3g01130 132 SUPERFAMILY Translation proteins SH3-like domain 5 93 IPR008991 -
Vian3g01130 132 PANTHER 60S RIBOSOMAL PROTEIN L14 1 131 IPR039660 GO:0003723|GO:0003735
Vian3g01130 132 Gene3D - 1 84 IPR014722 -
Vian3g01130 132 Gene3D - 92 127 - -
Vian3g01130 132 CDD KOW_RPL14 7 79 IPR041985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01130 Vian-Chr3 12426812 12427629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01130 1 131 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 80.153 2.77e-73 213
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01130 3 12426812 12427629 Vian3g01130 3 12426812 12427629 ECH