Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian3g01127 | ATGGCTCCAACCCCTTCTTCCAAACAAAACTACCCCACCCAGATGAAGACTCCACAGTCCAAGCACCGTCTCAATTTCCATGGCCCCAAATCAGCACTGCAAATGCACCCTTCTCCCAACCCGAATTGTGCTGCAAACAAGGAACCCCCTCCTGAACACCCAATTGAAGTAGTTGCCAGAATCCGTGACTACCCAGATCGAAAGGATAAGCCTTTATCTGTTCTTCAAACCAGTTCCAACTTGAGTTCTATCCGGGTTCGAGCTGATTTTGGGTACCGAGATTTCACCCTTGATGGGGTTTCTGTGTCTGAGGAAGAGGACCTGGATGTGTTCTATAAAAAGTTTGTGGAGTCGAGGATCAATGGAGTTAAGCTTGGGGACAAGTGCACCATCATGATGTATGGACCAACCGGTTCTGGGAAGAGTCACACAATGTTTGGGTGCTCGAAGCAGGCAGGGATTGTGTATAGGTCTCTTAGGGACATTCTTGGGGATGGGGATAATGCAGATGGAGATTCTAGGGGTGATTCAAGAGAAGAGCATCTCGGGTTGGGGACTTTTGTTCAAGTCACTGTTTTGGAGATTTACAATGAGGAGATTTATGATCTGTTGTCCACCAATGGAGGAGGTGGAGGGGGAGGATTTGGATTTGGCTGGCCTAAGGGGGGTAGTGCTTCAAAGGTGAAACTTGAAGTGATGGGGAAAAAGGCCAAGAATGCTACCTATATATCTGGAAATGAAGCAGGGAAGATCTCAAAAGAAATTCAGAAAGTGGAGAAGCGGAGGATTGTTAAAAGCACACTTTGTAATGATAGAAGCTCCAGAAGTCACTGCATGGTAATCCTTGATGTCCCAACTGTGGGAGGGCGACTAATGCTCGTAGACATGGCAGGATCAGAAAATATTGAACAAGCTGGTCAAATTGGATTTGAGGCCAAAATGCAGACTGCAAAAATCAATCAAGGAAATATAGCGCTGAAGAGAGTGGTGGAGTCCATTGCAAATGGTGATTCGCATGTACCATTTAGGGACAGCAAACTTACCATGCTTCTGCAGGATTCCTTTGAAGATGATAAGTCAAAAATTCTAATGATACTGTGTGCAAGTCCCGATCCTAAGGAGATACACAAGACAATCTCTACACTTGAATATGGGGCAAAAGCAAAATGCATAGTCCGTGGTCCTCATACTCCAGTGAAGGATGAGGAATCCTCTTCTGCTGTCATTTTGGGATCAAGAATTGCTGCAATGGATGAATTTATCTTGAAGCTACAAATGGAAAACAAACAAAGAGAGAAAGAGCGTAACGAAGCGCACAAAAAGCTTTTGAAGAAAGAAGAAGAAATTGCTGCATTAAGAAATAAATTGAACCAGGCAGAAGGAAAAGGAACTCCGCCAAGTGAGGAGGAAATTAACTTGAAGGTAAATGAACGCACTCGGCTTCTAAGACAAGAGTTGGAAAAGAAGTTGGCCGAGTGCCAAAGAATGACCAACGAGTTTGTTGAATTGGAGAGGAAGAGAATGGAGGAGAGGATACTGGAGCAGCAAGAGGAAGTTGAAACTCTGAGAAGGAGATTAGAAGAAATTGAGTTGCAGCTATCTTGTTCAAAGCAAGGGGGGAATTGTGAGGAAAACGAGTCAAAAGATATGGAATCAAGTGGGTTTATGAGAAGGCTATTGCGTGTTTACAAAAGTGAGGAGGATCCTGGAATGGTGAAGTCAATGGATTTGGACATGGATGACCAAGAACCCCTTGGCAGTGAAGTGAACATCGTTGGAGGAGTTATGTGTAGGACTGATTACAATGTTAAGCAAGACTTTTCAAACCTACCTTGTTCAAATACTTTGAATGGTGGAAAAGATGATGCTCATATCTTTGCACCCAACTTTGGCCAGAGGGTATGCCTTAGTACAGTATATGAGGAAGAGGGAGAAGGAGATGAAGACAAAGGGGGTGATGAGGAAGTAGAGAAAGAAGTGATAGAAGAAACCAAGGTATGTAGTGTTGAAAAGCCAAGTGCTGAAGGCTCCTTGGCAATATTAAATCTGTCGAACACAAGTCCAAAGAAAGACGATTGTTGTATCAATGTGGATGACAAGGATCTTGGGCCCTCTAGACTACTGAGAATTCAAAACATATTCACTCTTTGTGGCAACCAAAGAGAGCTGTCCCAGCACATTGGAACTCCACTTCCCACAAAAAAGAGAACCGGTGAAAATTTCGAGTTTTCTCCTGCCAAGACAATTGACAAGGATTCCGTTTTCAAGATCTCTAACAAGGAGAACTTCGAGCCACAAAATGTTCTGGGAAATTAG | 2316 | 0.4365 | MAPTPSSKQNYPTQMKTPQSKHRLNFHGPKSALQMHPSPNPNCAANKEPPPEHPIEVVARIRDYPDRKDKPLSVLQTSSNLSSIRVRADFGYRDFTLDGVSVSEEEDLDVFYKKFVESRINGVKLGDKCTIMMYGPTGSGKSHTMFGCSKQAGIVYRSLRDILGDGDNADGDSRGDSREEHLGLGTFVQVTVLEIYNEEIYDLLSTNGGGGGGGFGFGWPKGGSASKVKLEVMGKKAKNATYISGNEAGKISKEIQKVEKRRIVKSTLCNDRSSRSHCMVILDVPTVGGRLMLVDMAGSENIEQAGQIGFEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKEIHKTISTLEYGAKAKCIVRGPHTPVKDEESSSAVILGSRIAAMDEFILKLQMENKQREKERNEAHKKLLKKEEEIAALRNKLNQAEGKGTPPSEEEINLKVNERTRLLRQELEKKLAECQRMTNEFVELERKRMEERILEQQEEVETLRRRLEEIELQLSCSKQGGNCEENESKDMESSGFMRRLLRVYKSEEDPGMVKSMDLDMDDQEPLGSEVNIVGGVMCRTDYNVKQDFSNLPCSNTLNGGKDDAHIFAPNFGQRVCLSTVYEEEGEGDEDKGGDEEVEKEVIEETKVCSVEKPSAEGSLAILNLSNTSPKKDDCCINVDDKDLGPSRLLRIQNIFTLCGNQRELSQHIGTPLPTKKRTGENFEFSPAKTIDKDSVFKISNKENFEPQNVLGN | 771 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian3g01127 | 771 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Vian3g01127 | 771 | Gene3D | Kinesin motor domain | 33 | 394 | IPR036961 | - | |
Vian3g01127 | 771 | FunFam | p-loop containing nucleoside triphosphate hydrolase superfamily protein | 36 | 396 | - | - | |
Vian3g01127 | 771 | Pfam | Kinesin motor domain | 79 | 391 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vian3g01127 | 771 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
Vian3g01127 | 771 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 55 | 398 | IPR027417 | - | |
Vian3g01127 | 771 | PANTHER | KINESIN-RELATED | 57 | 621 | IPR027640 | GO:0003777|GO:0007018 | |
Vian3g01127 | 771 | Coils | Coil | 476 | 539 | - | - | |
Vian3g01127 | 771 | PRINTS | Kinesin heavy chain signature | 267 | 284 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vian3g01127 | 771 | PRINTS | Kinesin heavy chain signature | 290 | 308 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vian3g01127 | 771 | PRINTS | Kinesin heavy chain signature | 126 | 147 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vian3g01127 | 771 | PRINTS | Kinesin heavy chain signature | 340 | 361 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vian3g01127 | 771 | ProSiteProfiles | Kinesin motor domain profile. | 54 | 391 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vian3g01127 | 771 | Coils | Coil | 417 | 462 | - | - | |
Vian3g01127 | 771 | SMART | kinesin_4 | 52 | 399 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian3g01127 | Vian-Chr3 | 12413044 | 12416267 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian3g01127 | 109 | 403 | Calmodulin-binding Proteins | AT5G65930 | 27.742 | 1.85e-25 | 111 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vian3g01127 | 3 | 12413044 | 12416267 | Vian3g01127 | 3 | 12413044 | 12416267 | ECH |