Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01088 ATGTCTGGAAGAGAATTGGGAGTGCTTAATGCACTCGATGTGGCGAAGACGCAATGGTACCACTTCACAGCTATTGTGATTGCTGGAATGGGATTCTTTACCGATGCCTATGATCTCTTCTGTATTTCTCTTGTCACCAAGTTGCTGGGGAGGATATATTACACAGACATATCCAAACCAAAGCCTGGTGTCCTTCCTCCTAATGTGCAAGCTGCAGTGACTGGTGTAGCACTGTGCGGTACTTTGGCTGGCCAGCTTTTCTTTGGATGGCTTGGTGACAAGTTGGGAAGGAAAAAGGTTTATGGCTTAACTCTTATGCTGATGGTAGTGTGTTCCCTTGCCTCGGGGCTCTCTTTTGGAGATACCCCAAAGGGTGTCATGGCCACACTTTGTTTCTTCAGGTTCTGGCTTGGCTTTGGGATTGGTGGTGACTACCCTCTATCGGCTACAATCATGTCTGAATATGCCAACAAAAAGACTCGAGGGGCATTCATTGCTGCAGTGTTTGCCATGCAGGGATTTGGAATCTTGGCTGGTGGAATAGTTGCCTTGATTGTGTCATCTGCATATGACCACAAATACGATCTTCCCAGTTACAAAGAAAACCCAGAAGGATCAATAGTTCATTCCTTTGATTATGTTTGGCGTATCATTTTGATGTTTGGTGCAGTTCCAGCTGCGGTTACCTACTACTGGCGTATGAAAATGCCAGAGACAGCTCGTTACACGGCCCTTGTAGCCAGGAATGCAAAACAAGCTGCTTCAGACATGTCCAAGGTGCTGCAAGTTGAGATTGAAGCTGAAGAGGATAAGTTGAACCACATTGTTGAGAGTGAAAACCAAAGGTATAGCTTGTTCAGCAAGGAATTTGCCAAACGCCATGGGTTGCACTTGCTTGGAACCACAGTAACATGGTTTTTGTTGGACATTGCCTTCTACAGCCAGAACCTTTTCCAAAAGGACATTTTCAGTGCCATTGGATGGCTCCCTCCTTCACAAGAAATGAATGCAATCCATGAAGTTTATAGGATTGCAAGAGCACAAACACTCATAGCACTTTGCAGCACCGTGCCGGGGTACTGGTTTACCGTGGCCTTTATTGATTACATGGGACGTTTCGCCATCCAATTGATGGGTTTCTTCTTCATGACTGTCTTCATGTTTGCTCTTGCCATACCTTACAATCACTGGACCAAGAGAGAAAACAGAATTGGGTTTGTTGTGATGTACTCTCTCACCTTTTTTTTCTCCAATTTTGGTCCAAATGCCACCACGTTTGTTGTACCAGCGGAGATTTTCCCAGCAAGGTTAAGATCCACCTGTCATGGAATCTCAGCTGCAGCAGGAAAGGCAGGAGCAATTGTGGGTGCATTTGGGTTCTTGTATGCTGCACAGAGTACGGACCCCAAAAAGGTTGATCACGGTTACCCAACTGGTATTGGGGTTAAGAACTCTCTCATTGTGCTTGGTGTGGTCAACTTCTTAGGAATGTTATTCACCTTCTTAGTGCCAGAATCAAAGGGAAAATCACTGGAAGAGTTGAGTGGGGAGAATGAAGAAGGTCCTGAGGCTGTAGAGATGGCAGGGTCTACTAGGACGGTTCCAGTTTAA 1611 0.4562 MSGRELGVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTDISKPKPGVLPPNVQAAVTGVALCGTLAGQLFFGWLGDKLGRKKVYGLTLMLMVVCSLASGLSFGDTPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAYDHKYDLPSYKENPEGSIVHSFDYVWRIILMFGAVPAAVTYYWRMKMPETARYTALVARNAKQAASDMSKVLQVEIEAEEDKLNHIVESENQRYSLFSKEFAKRHGLHLLGTTVTWFLLDIAFYSQNLFQKDIFSAIGWLPPSQEMNAIHEVYRIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQLMGFFFMTVFMFALAIPYNHWTKRENRIGFVVMYSLTFFFSNFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSTDPKKVDHGYPTGIGVKNSLIVLGVVNFLGMLFTFLVPESKGKSLEELSGENEEGPEAVEMAGSTRTVPV 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01088 536 Pfam Sugar (and other) transporter 25 514 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vian3g01088 536 SUPERFAMILY MFS general substrate transporter 12 515 IPR036259 -
Vian3g01088 536 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 512 - -
Vian3g01088 536 Gene3D MFS general substrate transporter like domains 20 267 IPR036259 -
Vian3g01088 536 Gene3D MFS general substrate transporter like domains 272 531 IPR036259 -
Vian3g01088 536 CDD MFS_PhT 25 507 - -
Vian3g01088 536 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 508 IPR020846 GO:0022857
Vian3g01088 536 MobiDBLite consensus disorder prediction 512 536 - -
Vian3g01088 536 FunFam Inorganic phosphate transporter 1-6 20 528 - -
Vian3g01088 536 NCBIfam phosphate:H+ symporter 11 517 IPR004738 GO:0005315|GO:0006817|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01088 Vian-Chr3 11906652 11908262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01088 1 536 Inorganic Solute Cotransporters AT2G38940 79.104 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01088 K08176 - gmx:100792177 993.801