Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01082 ATGGTGAGGGCGGCGGTGAGTTGTGGTAGAGAGTGTGCGACGGAGGACGGTGGAGGGCTGGAGGAAGGAGCGGCGGGGACAGAGATACGCAGAGAGGGGCGGTTACGGGTGAGTAGTAACGAGGGAACAACATCTCTCATCATCTTCAGGCTGCAAGAAATTGCAAATCGGCTGAAGATGAAATTAAAGAAAAGGGCTGCCGGTTTGTTGAAATTGGAGAGCCTTCATGAAGGTAGGAAGGGGATCTTATCCATTGATGCAGAAATCTTTGAGGTTACTACTCCACTTCTGCACTTGGTGGAGGTGAAGAAATCAAATGGAGATACGCTGGAATATGAGAAAATACTGAAAGAAGACATAAGGCCTGCTCTTAAAGATATTGTTTGGATGTGTGAAATTAAGCATCATCGAGAAACTTGA 420 0.469 MVRAAVSCGRECATEDGGGLEEGAAGTEIRREGRLRVSSNEGTTSLIIFRLQEIANRLKMKLKKRAAGLLKLESLHEGRKGILSIDAEIFEVTTPLLHLVEVKKSNGDTLEYEKILKEDIRPALKDIVWMCEIKHHRET 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01082 139 CDD CIPK_C 36 125 - -
Vian3g01082 139 Gene3D Kinase associated domain 1, KA1 24 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01082 Vian-Chr3 11799250 11807120 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01082 23 132 CBL-interacting serine-threonine protein kinases AT5G58380 59.091 7.09e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01082 K07198 - gmx:100779316 136.732