Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01078 ATGGCTAAAGCTATGGAGCAACAGAAAAGAGCTTCTCATGTGTTCGTGTACAGAGAGTTAAAGCCACACCTGTTCATGGTTATAGTCCAGGTGGGATATACCTTCTTGTATTTCATCACTGAAGCCTCCTTCAATCATGGGATGAGTCCTCATGTCTATGTAACATATCGCCATATTGTGGCCACGGTTGTGATGTTCCCTTTTGCATACTTTCTGGAGAGAGATGCTAGACCGAAGCTGACATTTGCTCTTCTCATGGAAATTTTTTTGCTTTCTCTGTTAGGGGTTAGTGTAACCCTTAACATGTACTTTGCAAGCCTTAACTACACAAATCCGACCTTTGTTGCTTCCATGGTCAACACCATAGCTTCCCTTACCTTCATTATTGCTGTAGCAATCAGGTTTGAGGTTGTTGATGTTTGGAATCCTCGTGGTATTGCAAAAGTTATTGGGACCATGATCTCCTTAGCTGGTGTTTTGATTATGACACTGTACAAAGGACCCGTCATCAAAAATTTATGGCGTCCTCTAATCCACATTCCACGGAAAAGTGCTGCTATCACCGAAGACTGGTTAAAGGGTTCAATTCTTACAGTTTCAAGCTGTGTTGCATGGTCTTTATGGTACATTATGCAGGCATCCACTTTGAAAAGATACCCTGCTCAACTCTCACTCACCACGTGGATGTGCTTTATTGGAGCAGCACAATCAGCTGTTTTTACTGTTATAATAGAACACGACTCTTCTGCATGGACTATGGGGCTAAACATTGACTTGTGGTCCACAATATATGGTGGAGTTGTAGTTGCTGGCTTCATAATCTACATTCAACTATGGTGTACTGAGAAAAGAGGACCAGTTTTTGTCACAATGTTTAACCCTCTTTCTACTATATTGGTGGCAATTCTAGCCTACTTTGTCTTTGGTGAGAAACTTTATCTGGGCAGCATCATAGGTTCACTCATTGTCATAATTGGTCTTTACTTCCTGTTATGGGGCAAAGAACGTGACCAAGCGGTTTGCATGAAGAGCACAGATAAGTCACAGTGCAGTGCTGCAGACCCAGAATGCAGAATGTAG 1080 0.4213 MAKAMEQQKRASHVFVYRELKPHLFMVIVQVGYTFLYFITEASFNHGMSPHVYVTYRHIVATVVMFPFAYFLERDARPKLTFALLMEIFLLSLLGVSVTLNMYFASLNYTNPTFVASMVNTIASLTFIIAVAIRFEVVDVWNPRGIAKVIGTMISLAGVLIMTLYKGPVIKNLWRPLIHIPRKSAAITEDWLKGSILTVSSCVAWSLWYIMQASTLKRYPAQLSLTTWMCFIGAAQSAVFTVIIEHDSSAWTMGLNIDLWSTIYGGVVVAGFIIYIQLWCTEKRGPVFVTMFNPLSTILVAILAYFVFGEKLYLGSIIGSLIVIIGLYFLLWGKERDQAVCMKSTDKSQCSAADPECRM 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01078 359 PANTHER WAT1-RELATED PROTEIN 22 343 IPR030184 GO:0016020|GO:0022857
Vian3g01078 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Vian3g01078 359 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Vian3g01078 359 Pfam EamA-like transporter family 36 163 IPR000620 GO:0016020
Vian3g01078 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01078 Vian-Chr3 11773308 11775378 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01078 21 340 Nodulin-like Gene Family AT5G07050 42.424 9.24e-96 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01078 - - gmx:100527877 616.69