Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01018 ATGGGAGAGGTGAGGCTTCATGGATTTTGGTATAGTCCCTTTACTTTAAGGGTGGTATGGACCTTGAAGTTAAAGGATATACCATATGAGAATATAGAGGAAGATCGCTACAACAAGAGTGTTCAACTTCTTGAATACAACCCAGTGCACAAGAAAACTCCAGTGCTAGTTCATAATGAAAAACCTTTATGTGAGTCCATGATTATTGTTGAATACATAGATCAGATTTGGCCACACAACCCATTGCTTCCTTCTGATCCCTACAACAGAGCTTTGGCACGGTTTTGGGTTAATTATACTGAAGAAATGTTCGCTGCAGGTGTGAAATTCTTCCGTAGCATTACTGATGAAGAACGAGAAAAGAGCATGGAGAATCTATGGAAGCATTTCATGGTTGTTGAGACTCAGTGTTTTGGTGATGAGAAGAAAATTTTTGGGGGAGAAATTATTAACATTGTGGACATAGCTTTTGGGTCCATGTTCAAATTTCTTGAGGTTGCAGAAGATATTATTGGAGCGAAGGTCCTTCAAGATGAGAAATTCCCTCAGCTGTGTTCCTGGTATAATAATTTCAAGAATGTTCCTGTTATTAAAGAAAATCTCCCAGACCACGAGAAAATGGTAGCTTTTATTAAGATTATTAGAGAGAAAAACTTGGCATCTTCCTAA 669 0.3812 MGEVRLHGFWYSPFTLRVVWTLKLKDIPYENIEEDRYNKSVQLLEYNPVHKKTPVLVHNEKPLCESMIIVEYIDQIWPHNPLLPSDPYNRALARFWVNYTEEMFAAGVKFFRSITDEEREKSMENLWKHFMVVETQCFGDEKKIFGGEIINIVDIAFGSMFKFLEVAEDIIGAKVLQDEKFPQLCSWYNNFKNVPVIKENLPDHEKMVAFIKIIREKNLASS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01018 222 CDD GST_N_Tau 4 77 - -
Vian3g01018 222 CDD GST_C_Tau 87 214 IPR045074 GO:0004364|GO:0006749
Vian3g01018 222 PRINTS Omega-class glutathione S-transferase signature 144 163 IPR005442 GO:0004364|GO:0005737
Vian3g01018 222 PRINTS Omega-class glutathione S-transferase signature 2 17 IPR005442 GO:0004364|GO:0005737
Vian3g01018 222 PRINTS Omega-class glutathione S-transferase signature 77 91 IPR005442 GO:0004364|GO:0005737
Vian3g01018 222 SFLD Main (cytGST) 1 220 - -
Vian3g01018 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 208 IPR045073 -
Vian3g01018 222 FunFam Glutathione S-transferase U9 83 221 - -
Vian3g01018 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 210 IPR010987 -
Vian3g01018 222 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Vian3g01018 222 SUPERFAMILY GST C-terminal domain-like 76 217 IPR036282 -
Vian3g01018 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Vian3g01018 222 Gene3D - 83 222 - -
Vian3g01018 222 Gene3D Glutaredoxin 1 82 - -
Vian3g01018 222 Pfam Glutathione S-transferase, N-terminal domain 4 75 IPR004045 -
Vian3g01018 222 FunFam Glutathione S-transferase GSTU6 1 83 - -
Vian3g01018 222 SFLD Main.3: Omega- and Tau-like 1 220 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01018 Vian-Chr3 11105210 11106035 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01018 4 216 Glutathione S-transferase Gene Family AT2G29490 43.779 1.54e-53 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01018 K00799 - gmx:547584 364.77